RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 OLFML2BQ68BL8 750 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 SLC26A11Q86WA9 606 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 NCAPG2Q86XI2 1143 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 DEFB107AQ8IZN7 70 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 EZH1Q92800 747 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-208ENST00000463007 NDNQ99608 321 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 WWP1Q9H0M0 922 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 ETNK2Q9NVF9 386 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 PNPOQ9NVS9 261 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 DDX56Q9NY93 547 aaKnown RBP12.85□□□□□ -0.35
HDAC4-208ENST00000463007 TAGLN3Q9UI15 199 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 EVPLQ92817 2033 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 RALGAPA2Q2PPJ7 1873 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 E9PBE3 544 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 KLHL41O60662 606 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 HMGCRP04035 888 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 ERBB2P04626 1255 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 PGK2P07205 417 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 CD1EP15812 388 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 PPM1JQ5JR12 505 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 TTC39BQ5VTQ0 682 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-208ENST00000463007 ERO1BQ86YB8 467 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 NIPA2Q8N8Q9 360 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 ADAM32Q8TC27 787 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 NLRP4Q96MN2 994 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 ADPGKQ9BRR6 497 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 TUBB6Q9BUF5 446 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 RHBDL2Q9NX52 303 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 APPL1Q9UKG1 709 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 PRKCBP05771 671 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 KRT7P08729 469 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 PHKA2P46019 1235 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 MBTD1Q05BQ5 628 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 MED21Q13503 144 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 IYDQ6PHW0 289 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 MAMDC4Q6UXC1 1216 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 TNS4Q8IZW8 715 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 HEXIM2Q96MH2 286 aaKnown RBP12.85□□□□□ -0.35
HDAC4-208ENST00000463007 NIF3L1Q9GZT8 377 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 RNPEPQ9H4A4 650 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 PLLPQ9Y342 182 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 CSADQ9Y600 493 aa12.85□□□□□ -0.35
HDAC4-208ENST00000463007 CAPN8A6NHC0 703 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 C3orf70A6NLC5 250 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 INO80B-WBP1J3KQ70 363 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 DCXO43602 365 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 TM7SF2O76062 418 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 PDGFRAP16234 1089 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 NELFEP18615 380 aaKnown RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 SLC25A11Q02978 314 aaKnown RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 FASTKD1Q53R41 847 aaKnown RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 ATG16L1Q676U5 607 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 GADL1Q6ZQY3 521 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 TMEM192Q8IY95 271 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 GALNT4Q8N4A0 578 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 PEBP4Q96S96 227 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 BCO2Q9BYV7 579 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 UNKQ9C0B0 810 aaKnown RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 MIS12Q9H081 205 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 MINDY3Q9H8M7 445 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 SEPT10Q9P0V9 454 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 ADAMTS6Q9UKP5 1117 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 ACKR2O00590 384 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 HNRNPCL1O60812 293 aaKnown RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 ADORA2AP29274 412 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 YWHAZP63104 245 aaKnown RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 PPIL2Q13356 520 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 AMHR2Q16671 573 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 LRRC23Q53EV4 343 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 LRRC38Q5VT99 294 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 DRICH1Q6PGQ1 229 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 MPZL3Q6UWV2 235 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 BBS12Q6ZW61 710 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 IFNLR1Q8IU57 520 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 ZNF398Q8TD17 642 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 GDPD5Q8WTR4 605 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 TRAPPC12Q8WVT3 735 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 TWNKQ96RR1 684 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 XAB2Q9HCS7 855 aaKnown RBP12.84□□□□□ -0.35
HDAC4-208ENST00000463007 SIX4Q9UIU6 781 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 PCDHGB4Q9UN71 923 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 PCDHGB5Q9Y5G0 923 aa12.84□□□□□ -0.35
HDAC4-208ENST00000463007 AIM2O14862 343 aa12.83□□□□□ -0.35
HDAC4-208ENST00000463007 C22orf31O95567 290 aa12.83□□□□□ -0.35
HDAC4-208ENST00000463007 RAG1P15918 1043 aa12.83□□□□□ -0.35
HDAC4-208ENST00000463007 OSBPP22059 807 aa12.83□□□□□ -0.35
HDAC4-208ENST00000463007 SLC26A2P50443 739 aa12.83□□□□□ -0.35
HDAC4-208ENST00000463007 SLC18A1P54219 525 aa12.83□□□□□ -0.35
HDAC4-208ENST00000463007 BCAR1P56945 870 aa12.83□□□□□ -0.35
HDAC4-208ENST00000463007 RNF149Q8NC42 400 aa12.83□□□□□ -0.35
HDAC4-208ENST00000463007 OR6Y1Q8NGX8 325 aa12.83□□□□□ -0.35
HDAC4-208ENST00000463007 PLA2G4CQ9UP65 541 aa12.83□□□□□ -0.35
HDAC4-208ENST00000463007 APOBEC2Q9Y235 224 aaKnown RBP12.83□□□□□ -0.35
HDAC4-208ENST00000463007 TRIP11Q15643 1979 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 B4GALT5O43286 388 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 ATXN1P54253 815 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms