RNA–Protein interactions for RNA: ENST00000462637.5

PCCB-204, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-204ENST00000462637 VSTM1Q6UX27 236 aa16.22■□□□□ 0.19
PCCB-204ENST00000462637 RNF139Q8WU17 664 aa16.22■□□□□ 0.19
PCCB-204ENST00000462637 CPT1BQ92523 772 aa16.22■□□□□ 0.19
PCCB-204ENST00000462637 USP29Q9HBJ7 922 aa16.22■□□□□ 0.19
PCCB-204ENST00000462637 FBXW11Q9UKB1 542 aa16.22■□□□□ 0.19
PCCB-204ENST00000462637 TRIM43BA6NCK2 446 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 HACD1B0YJ81 288 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 RGS16O15492 202 aaPredicted RBP16.21■□□□□ 0.19
PCCB-204ENST00000462637 KCNN4O15554 427 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 HIF1AQ16665 826 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 SLC45A4Q5BKX6 768 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 VARS2Q5ST30 1063 aaKnown RBP16.21■□□□□ 0.19
PCCB-204ENST00000462637 NCBP2-AS2Q69YL0 99 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 ZNF280DQ6N043 979 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 PPP1R21Q6ZMI0 780 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 NAT8LQ8N9F0 302 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 TRIM43Q96BQ3 446 aaPredicted RBP16.21■□□□□ 0.19
PCCB-204ENST00000462637 QKIQ96PU8 341 aaKnown RBP eCLIP16.21■□□□□ 0.198e-7■■■□□ 15.7
PCCB-204ENST00000462637 OXCT2Q9BYC2 517 aaPredicted RBP16.21■□□□□ 0.19
PCCB-204ENST00000462637 WDR6Q9NNW5 1121 aaKnown RBP16.21■□□□□ 0.19
PCCB-204ENST00000462637 SAYSD1Q9NPB0 183 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 ARHGEF4Q9NR80 690 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 DNAJC17Q9NVM6 304 aaKnown RBP16.21■□□□□ 0.19
PCCB-204ENST00000462637 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.21■□□□□ 0.19
PCCB-204ENST00000462637 PCDHB5Q9Y5E4 795 aa16.21■□□□□ 0.19
PCCB-204ENST00000462637 TRIM66O15016 1216 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 SHOX2O60902 331 aaPredicted RBP16.2■□□□□ 0.18
PCCB-204ENST00000462637 TCEA3O75764 348 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 AGTP01019 485 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 AMPD1P23109 780 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 MAGEA11P43364 429 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 HCAR3P49019 387 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 CXCR3P49682 368 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 SLC5A3P53794 718 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 GBE1Q04446 702 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 MRPL58Q14197 206 aaKnown RBP16.2■□□□□ 0.18
PCCB-204ENST00000462637 CTXN3Q4LDR2 81 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 FAM171A1Q5VUB5 890 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 MFSD5Q6N075 450 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 PDZD4Q76G19 769 aaPredicted RBP16.2■□□□□ 0.18
PCCB-204ENST00000462637 CRIPAKQ8N1N5 446 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 PYROXD2Q8N2H3 581 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 EDEM1Q92611 657 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 TLCD1Q96CP7 247 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 C8orf48Q96LL4 319 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 PWWP2AQ96N64 755 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 SERPINB12Q96P63 405 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 FERMT1Q9BQL6 677 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 CAPS2Q9BXY5 557 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 FRMD8Q9BZ67 464 aaPredicted RBP16.2■□□□□ 0.18
PCCB-204ENST00000462637 ABCC13Q9NSE7 274 aa16.2■□□□□ 0.18
PCCB-204ENST00000462637 ABI2Q9NYB9 513 aaPredicted RBP16.2■□□□□ 0.18
PCCB-204ENST00000462637 NOVA2Q9UNW9 492 aaKnown RBP16.2■□□□□ 0.18
PCCB-204ENST00000462637 KIAA0100Q14667 2235 aaKnown RBP16.2■□□□□ 0.18
PCCB-204ENST00000462637 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.19■□□□□ 0.18
PCCB-204ENST00000462637 TLDC2A0PJX2 215 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 EEF2KO00418 725 aaKnown RBP16.19■□□□□ 0.18
PCCB-204ENST00000462637 TNFRSF10BO14763 440 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 ALOX15BO15296 676 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 FGFR3P22607 806 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 ITGB8P26012 769 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 RBL1P28749 1068 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 SLC11A1P49279 550 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 YWHAGP61981 247 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCCB-204ENST00000462637 BASP1P80723 227 aaKnown RBP16.19■□□□□ 0.18
PCCB-204ENST00000462637 STAT4Q14765 748 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 TCTN1Q2MV58 587 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 DNAJC21Q5F1R6 531 aaKnown RBP16.19■□□□□ 0.18
PCCB-204ENST00000462637 RFX8Q6ZV50 586 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 DEFB128Q7Z7B8 93 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 LRRC43Q8N309 656 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 UHMK1Q8TAS1 419 aaKnown RBP16.19■□□□□ 0.18
PCCB-204ENST00000462637 WDCPQ9H6R7 721 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 PRDM5Q9NQX1 630 aaPredicted RBP16.19■□□□□ 0.18
PCCB-204ENST00000462637 DTLQ9NZJ0 730 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 RAD54BQ9Y620 910 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 A0A087WUV0 522 aaPredicted RBP16.19■□□□□ 0.18
PCCB-204ENST00000462637 TBKBP1A7MCY6 615 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 H7C4K7 107 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 KIAA0355O15063 1070 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 CHADO15335 359 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 TIMP1P01033 207 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 OR4Q2P0C623 313 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 ATP5DP30049 168 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 SMARCB1Q12824 385 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 DPYSQ14117 519 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 BTBD8Q5XKL5 378 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 SCN4BQ8IWT1 228 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 PDIK1LQ8N165 341 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 ARHGAP18Q8N392 663 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 ADAM32Q8TC27 787 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 OLFM3Q96PB7 478 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 MAGEB5Q9BZ81 275 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 KLC2Q9H0B6 622 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 FBXO44Q9H4M3 255 aa16.19■□□□□ 0.18
PCCB-204ENST00000462637 XPO7Q9UIA9 1087 aaKnown RBP16.19■□□□□ 0.18
PCCB-204ENST00000462637 CREB3O43889 395 aa16.18■□□□□ 0.18
PCCB-204ENST00000462637 GCATO75600 419 aa16.18■□□□□ 0.18
PCCB-204ENST00000462637 DGKIO75912 1065 aa16.18■□□□□ 0.18
PCCB-204ENST00000462637 STK10O94804 968 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms