RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 DTLQ9NZJ0 730 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 COX16Q9P0S2 106 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 MARCOQ9UEW3 520 aaPredicted RBP17.51■□□□□ 0.39
ACTB-207ENST00000462494 GJD2Q9UKL4 321 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 PCDHA11Q9Y5I1 949 aa17.51■□□□□ 0.39
ACTB-207ENST00000462494 DICER1Q9UPY3 1922 aaKnown RBP17.5■□□□□ 0.39
ACTB-207ENST00000462494 FCHO1O14526 889 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 KLF11O14901 512 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 DNAJC6O75061 913 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 RECQL4O94761 1208 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 SNAI1O95863 264 aaPredicted RBP17.5■□□□□ 0.39
ACTB-207ENST00000462494 TOP3BO95985 862 aaKnown RBP17.5■□□□□ 0.39
ACTB-207ENST00000462494 MMP3P08254 477 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 GSTA2P09210 222 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 SMPD1P17405 629 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 GNAZP19086 355 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 TPSB2P20231 275 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 IRX4P78413 519 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 CBLBQ13191 982 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 TAF11Q15544 211 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 TPSAB1Q15661 275 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 ZBTB6Q15916 424 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 ATG16L1Q676U5 607 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 NCBP2-AS2Q69YL0 99 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 RINLQ6ZS11 566 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 APBB1IPQ7Z5R6 666 aaPredicted RBP17.5■□□□□ 0.39
ACTB-207ENST00000462494 ARID3BQ8IVW6 561 aaPredicted RBP17.5■□□□□ 0.39
ACTB-207ENST00000462494 UNC5BQ8IZJ1 945 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 OR6J1Q8NGC5 347 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 SLC2A14Q8TDB8 520 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 TFB1MQ8WVM0 346 aaKnown RBP17.5■□□□□ 0.39
ACTB-207ENST00000462494 CENPIQ92674 756 aaPredicted RBP17.5■□□□□ 0.39
ACTB-207ENST00000462494 MTBPQ96DY7 904 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 LGMNQ99538 433 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 C11orf84Q9BUA3 381 aaPredicted RBP17.5■□□□□ 0.39
ACTB-207ENST00000462494 SNX25Q9H3E2 840 aa17.5■□□□□ 0.39
ACTB-207ENST00000462494 WDR27A2RRH5 827 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 FAM159BA6NKW6 160 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 ECM2O94769 699 aaPredicted RBP17.49■□□□□ 0.39
ACTB-207ENST00000462494 SMAD1Q15797 465 aaKnown RBP17.49■□□□□ 0.39
ACTB-207ENST00000462494 FBXO47Q5MNV8 452 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 BSPRYQ5W0U4 402 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 NOTUMQ6P988 496 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 DPP9Q86TI2 863 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 TRIM42Q8IWZ5 723 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 FBXO41Q8TF61 875 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 HTR3CQ8WXA8 447 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 MCUR1Q96AQ8 359 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 FAM149B1Q96BN6 582 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 NMUR2Q9GZQ4 415 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 ADAMTS10Q9H324 1103 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 XAB2Q9HCS7 855 aaKnown RBP17.49■□□□□ 0.39
ACTB-207ENST00000462494 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.49■□□□□ 0.391e-16■■□□□ 13.4
ACTB-207ENST00000462494 SLC17A6Q9P2U8 582 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 RBM47A0AV96 593 aaKnown RBP17.49■□□□□ 0.39
ACTB-207ENST00000462494 HMX2A2RU54 273 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 ZNF487B1APH4 448 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 GSC2O15499 205 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 VAV1P15498 845 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 ARL4AP40617 200 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 CCNFP41002 786 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 DGKDQ16760 1214 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 NBPF20Q3BBV1 942 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 CES4AQ5XG92 561 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 C4orf50Q6ZRC1 276 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 KBTBD7Q8WVZ9 684 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 CEP41Q9BYV8 373 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 KATNBL1Q9H079 304 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 SEPT10Q9P0V9 454 aa17.49■□□□□ 0.39
ACTB-207ENST00000462494 KPNA7A9QM74 516 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 SPTLC1O15269 473 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 CPA2P48052 419 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 CCNG1P51959 295 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 SARNPP82979 210 aaKnown RBP17.48■□□□□ 0.39
ACTB-207ENST00000462494 AP1B1Q10567 949 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 SEMA5AQ13591 1074 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 DSTYKQ6XUX3 929 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 ZCCHC23Q6ZST2 131 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 LBHD1Q9BQE6 289 aaPredicted RBP17.48■□□□□ 0.39
ACTB-207ENST00000462494 GOLGA2P5Q9HBQ8 144 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 TMPRSS4Q9NRS4 437 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.48■□□□□ 0.392e-13■■■□□ 16.6
ACTB-207ENST00000462494 IL1BP01584 269 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 SULT1E1P49888 294 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 SLC8A3P57103 927 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 SESN2P58004 480 aaPredicted RBP17.48■□□□□ 0.39
ACTB-207ENST00000462494 KHDC1Q4VXA5 237 aaKnown RBP17.48■□□□□ 0.39
ACTB-207ENST00000462494 MDH1BQ5I0G3 518 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 TRIM68Q6AZZ1 485 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 BZW1Q7L1Q6 419 aaKnown RBP17.48■□□□□ 0.39
ACTB-207ENST00000462494 COLGALT1Q8NBJ5 622 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 APBB2Q92870 758 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 SLC10A4Q96EP9 437 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 C7orf26Q96N11 449 aa17.48■□□□□ 0.39
ACTB-207ENST00000462494 PPARGC1AQ9UBK2 798 aaKnown RBP17.48■□□□□ 0.39
ACTB-207ENST00000462494 PDHXO00330 501 aa17.47■□□□□ 0.39
ACTB-207ENST00000462494 GPR32O75388 356 aa17.47■□□□□ 0.39
ACTB-207ENST00000462494 CRHR1P34998 444 aa17.47■□□□□ 0.39
ACTB-207ENST00000462494 SESN3P58005 492 aa17.47■□□□□ 0.39
ACTB-207ENST00000462494 KRT72Q14CN4 511 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms