RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SIRPGQ9P1W8 387 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 MTRRQ9UBK8 725 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 STRIP2Q9ULQ0 834 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 SLC6A14Q9UN76 642 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 TNFSF13BQ9Y275 285 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 RRP15Q9Y3B9 282 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 BACE2Q9Y5Z0 518 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 KCNMB2Q9Y691 235 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 TNRC6BQ9UPQ9 1833 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 ATMQ13315 3056 aa6.36□□□□□ -1.39
SMARCC1-204ENST00000462198 UBR5O95071 2799 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 PTPRDP23468 1912 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 NOTCH2Q04721 2471 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ZMYM2Q9UBW7 1377 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 CASTOR2A6NHX0 329 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 B8ZZF3 427 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ANKRD63C9JTQ0 380 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 BIN1O00499 593 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 PHACTR2O75167 634 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 PPFIA2O75334 1257 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 PIGRP01833 764 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 MCF2P10911 925 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ATF2P15336 505 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 PROZP22891 400 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 IGFBP6P24592 240 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 EIF2S3P41091 472 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 PTGER3P43115 390 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 YARSP54577 528 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ARPP19P56211 112 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 OSTNP61366 133 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 CBLBQ13191 982 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 TUSC3Q13454 348 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 KNOP1Q1ED39 458 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 DUOXA1Q1HG43 343 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 RNF187Q5TA31 235 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ZNF658Q5TYW1 1059 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ISM2Q6H9L7 571 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 SYT10Q6XYQ8 523 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 LRRC69Q6ZNQ3 347 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ARMCX6Q7L4S7 300 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 LPCAT2Q7L5N7 544 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 EPM2AIP1Q7L775 607 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 CCDC186Q7Z3E2 898 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 GPR155Q7Z3F1 870 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ZNF438Q7Z4V0 828 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 NELFCDQ8IXH7 590 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 C10orf67Q8IYJ2 551 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 MINDY1Q8N5J2 469 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 KIAA0895Q8NCT3 520 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 OR2I1PQ8NGU4 316 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 RPLP0P6Q8NHW5 317 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 SHKBP1Q8TBC3 707 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ZNF507Q8TCN5 953 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 NOC3LQ8WTT2 800 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 CACTINQ8WUQ7 758 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 SCFD1Q8WVM8 642 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 POMGNT1Q8WZA1 660 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ZBTB45Q96K62 511 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 SUSD3Q96L08 255 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 FCRL3Q96P31 734 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ACAP3Q96P50 834 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 SPOCK3Q9BQ16 436 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 STRA6Q9BX79 667 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 CDT1Q9H211 546 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 NXF3Q9H4D5 531 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 METTL14Q9HCE5 456 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 PTPRHQ9HD43 1115 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 GKN1Q9NS71 199 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 ZDHHC3Q9NYG2 299 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 CEP72Q9P209 647 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 MAN1B1Q9UKM7 699 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 MAPK8IP1Q9UQF2 711 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 FNDC3AQ9Y2H6 1198 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 GDAQ9Y2T3 454 aa6.35□□□□□ -1.39
SMARCC1-204ENST00000462198 TEX51A0A1B0GUA7 166 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 TISP43B9A030 160 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 ZRANB2O95218 330 aaKnown RBP eCLIP6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 SERPINF2P08697 491 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 DRD1P21728 446 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 ITPKAP23677 461 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 PAX7P23759 505 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 GSTT1P30711 240 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 HOXD13P35453 343 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 ARSDP51689 593 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 EPHA5P54756 1037 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 SNRPFP62306 86 aaKnown RBP6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 ROR1Q01973 937 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 MCL1Q07820 350 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 LRMPQ12912 555 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 SLC14A1Q13336 389 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 STIM1Q13586 685 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 PWP1Q13610 501 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 IQCB1Q15051 598 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 KYAT1Q16773 422 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 BMT2Q1RMZ1 405 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 FBXO43Q4G163 708 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 SEZ6Q53EL9 994 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 TAF1BQ53T94 588 aaPredicted RBP6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 CEP135Q66GS9 1140 aa6.34□□□□□ -1.39
SMARCC1-204ENST00000462198 TMEM214Q6NUQ4 689 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms