RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 ZCWPW1Q9H0M4 648 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 PABPC3Q9H361 631 aaKnown RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 C11orf49Q9H6J7 331 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 WDCPQ9H6R7 721 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 SAYSD1Q9NPB0 183 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 IGSF5Q9NSI5 407 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 SEPT10Q9P0V9 454 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 VWA8A3KMH1 1905 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 HMGB1P1B2RPK0 211 aaPredicted RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 HHLA1C9JL84 531 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 RGS16O15492 202 aaPredicted RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 ENDOD1O94919 500 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 OAZ2O95190 189 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 F9P00740 461 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 AMHP03971 560 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 IVLP07476 585 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 HPDP32754 393 aaPredicted RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 RPL22P35268 128 aaKnown RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 PBX3P40426 434 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 ALDH7A1P49419 539 aaKnown RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 GPR15P49685 360 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 CTCFP49711 727 aaPredicted RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 GDF10P55107 478 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 ARL4CP56559 192 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 PITX1P78337 314 aaPredicted RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 ZNF844Q08AG5 666 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 SLC29A2Q14542 456 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 MORF4L2Q15014 288 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 DPYSL2Q16555 572 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 DDR2Q16832 855 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 TCTN1Q2MV58 587 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 MGAT5BQ3V5L5 792 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 TTMPQ5BVD1 217 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 RAB41Q5JT25 222 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 HP1BP3Q5SSJ5 553 aaPredicted RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 HEATR6Q6AI08 1181 aaKnown RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 HIBCHQ6NVY1 386 aaPredicted RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 FBXO46Q6PJ61 603 aaPredicted RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.04□□□□□ -1.288e-8■■■■■ 46.8
MSH2-204ENST00000461394 CAPN12Q6ZSI9 719 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 ARHGEF18Q6ZSZ5 1173 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 FAM43BQ6ZT52 329 aaPredicted RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 NUDT18Q6ZVK8 323 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 CENPUQ71F23 418 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 BZW1Q7L1Q6 419 aaKnown RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 ANKRD33Q7Z3H0 272 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 CROCCP2Q86T23 111 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 TAC4Q86UU9 113 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 VSIG1Q86XK7 387 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 PSTKQ8IV42 348 aaKnown RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 PPIL6Q8IXY8 311 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 IQCKQ8N0W5 287 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 SH2D3CQ8N5H7 860 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 CCDC33Q8N5R6 958 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 PQLC3Q8N755 202 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 PLD5Q8N7P1 536 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 GLIS1Q8NBF1 620 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 CCNYQ8ND76 341 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 SCAMP5Q8TAC9 235 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 FBXO32Q969P5 355 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 ARL8AQ96BM9 186 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 FAF2Q96CS3 445 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 ATP6V1G3Q96LB4 118 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 PWWP2AQ96N64 755 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 TOX2Q96NM4 488 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 CSPG4P5Q96PW8 444 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 RBM15Q96T37 977 aaKnown RBP eCLIP7.04□□□□□ -1.28
MSH2-204ENST00000461394 SH3GL2Q99962 352 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 CCDC77Q9BR77 488 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 FOXP3Q9BZS1 431 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 STMN4Q9H169 189 aaPredicted RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 CDC42EP4Q9H3Q1 356 aaKnown RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 SEMA4AQ9H3S1 761 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 VPS37BQ9H9H4 285 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 TMBIM4Q9HC24 238 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 CSNK1G1Q9HCP0 422 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 PNPLA8Q9NP80 782 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 TMPRSS4Q9NRS4 437 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 ABCC13Q9NSE7 274 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 PIGVQ9NUD9 493 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 TMEM30AQ9NV96 361 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 WBP1LQ9NX94 342 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 CWC15Q9P013 229 aaKnown RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 PAK5Q9P286 719 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 HCSTQ9UBK5 93 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 XPO7Q9UIA9 1087 aaKnown RBP7.04□□□□□ -1.28
MSH2-204ENST00000461394 NEU2Q9Y3R4 380 aa7.04□□□□□ -1.28
MSH2-204ENST00000461394 PLXNA3P51805 1871 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 SHROOM3Q8TF72 1996 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 A0A1W2PQH9 124 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 ZNF487B1APH4 448 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 E7EVH7 732 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 C2CD2LO14523 706 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 RASGRF2O14827 1237 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 PPP1R12AO14974 1030 aaPredicted RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 RIPK2O43353 540 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 MOCS2O96007 188 aaPredicted RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 CXCL10P02778 98 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 SHBGP04278 402 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms