RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 SMC1BQ8NDV3 1235 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 UROC1Q96N76 676 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 TMPRSS4Q9NRS4 437 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 COX16Q9P0S2 106 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 FAM47DPA6NHR8 397 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 INPPL1O15357 1258 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 PRPF4O43172 522 aaKnown RBP eCLIP20.94■□□□□ 0.941e-6■■□□□ 13.8
CCM2-203ENST00000461377 KIAA0754O94854 1291 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 VIMP08670 466 aaKnown RBP20.94■□□□□ 0.94
CCM2-203ENST00000461377 KRT15P19012 456 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 IBSPP21815 317 aaPredicted RBP20.94■□□□□ 0.94
CCM2-203ENST00000461377 ACLYP53396 1101 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 AIF1P55008 147 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 PAN2Q504Q3 1202 aaKnown RBP20.94■□□□□ 0.94
CCM2-203ENST00000461377 INTS6LQ5JSJ4 861 aaKnown RBP20.94■□□□□ 0.94
CCM2-203ENST00000461377 ADGRD1Q6QNK2 874 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 BZW1Q7L1Q6 419 aaKnown RBP20.94■□□□□ 0.94
CCM2-203ENST00000461377 BHLHA9Q7RTU4 235 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 PIGWQ7Z7B1 504 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 AGGF1Q8N302 714 aaeCLIP20.94■□□□□ 0.94
CCM2-203ENST00000461377 MCUQ8NE86 351 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 SLC7A14Q8TBB6 771 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 NTAN1Q96AB6 310 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 PAFAH2Q99487 392 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 PKMYT1Q99640 499 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 SRRDQ9UH36 339 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 DSEQ9UL01 958 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 INPP5FQ9Y2H2 1132 aa20.94■□□□□ 0.94
CCM2-203ENST00000461377 SF3B1O75533 1304 aaKnown RBP eCLIP20.93■□□□□ 0.942e-7■■■■■ 82.1
CCM2-203ENST00000461377 CAPN9O14815 690 aa20.93■□□□□ 0.94
CCM2-203ENST00000461377 MFSD11O43934 449 aa20.93■□□□□ 0.94
CCM2-203ENST00000461377 SPAG6O75602 509 aa20.93■□□□□ 0.94
CCM2-203ENST00000461377 METTL18O95568 372 aa20.93■□□□□ 0.94
CCM2-203ENST00000461377 LTFP02788 710 aa20.93■□□□□ 0.94
CCM2-203ENST00000461377 USP17L7P0C7H9 530 aa20.93■□□□□ 0.94
CCM2-203ENST00000461377 SLC18A1P54219 525 aa20.93■□□□□ 0.94
CCM2-203ENST00000461377 CAND1Q86VP6 1230 aaKnown RBP20.93■□□□□ 0.94
CCM2-203ENST00000461377 TFB1MQ8WVM0 346 aaKnown RBP20.93■□□□□ 0.94
CCM2-203ENST00000461377 PGAP3Q96FM1 320 aaPredicted RBP20.93■□□□□ 0.94
CCM2-203ENST00000461377 SGSM3Q96HU1 749 aa20.93■□□□□ 0.94
CCM2-203ENST00000461377 RHOBTB2Q9BYZ6 727 aa20.93■□□□□ 0.94
CCM2-203ENST00000461377 NSRP1Q9H0G5 558 aaKnown RBP20.93■□□□□ 0.94
CCM2-203ENST00000461377 WDR6Q9NNW5 1121 aaKnown RBP20.93■□□□□ 0.94
CCM2-203ENST00000461377 MLXIPLQ9NP71 852 aa20.93■□□□□ 0.94
CCM2-203ENST00000461377 KBTBD13C9JR72 458 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 AVILO75366 819 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 VAV1P15498 845 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 TPSB2P20231 275 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 SCAPQ12770 1279 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 IFT88Q13099 833 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 DPYSQ14117 519 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 TPSAB1Q15661 275 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 HEATR6Q6AI08 1181 aaKnown RBP20.92■□□□□ 0.94
CCM2-203ENST00000461377 VPS52Q8N1B4 723 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 RSPH1Q8WYR4 309 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 MRRFQ96E11 262 aaKnown RBP20.92■□□□□ 0.94
CCM2-203ENST00000461377 APRTP07741 180 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 STX2P32856 288 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 ADRA1BP35368 520 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 TAX1BP1Q86VP1 789 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 CCDC33Q8N5R6 958 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 GDAP1Q8TB36 358 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 DENND1AQ8TEH3 1009 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 DCAKDQ8WVC6 231 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 HTR3CQ8WXA8 447 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 CABS1Q96KC9 395 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 SMC6Q96SB8 1091 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 CYTH2Q99418 400 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 KIF9Q9HAQ2 790 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 PNPLA8Q9NP80 782 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 RRN3Q9NYV6 651 aa20.92■□□□□ 0.94
CCM2-203ENST00000461377 SMG5Q9UPR3 1016 aaKnown RBP20.92■□□□□ 0.94
CCM2-203ENST00000461377 TCP11X1B4DZS4 312 aa20.91■□□□□ 0.94
CCM2-203ENST00000461377 PAFAH1B3Q15102 231 aaKnown RBP20.91■□□□□ 0.94
CCM2-203ENST00000461377 CTU1Q7Z7A3 348 aaKnown RBP20.91■□□□□ 0.94
CCM2-203ENST00000461377 CCDC197Q8NCU1 140 aa20.91■□□□□ 0.94
CCM2-203ENST00000461377 HASPINQ8TF76 798 aa20.91■□□□□ 0.94
CCM2-203ENST00000461377 MZB1Q8WU39 189 aa20.91■□□□□ 0.94
CCM2-203ENST00000461377 IRGQQ8WZA9 623 aa20.91■□□□□ 0.94
CCM2-203ENST00000461377 MAGEB18Q96M61 343 aa20.91■□□□□ 0.94
CCM2-203ENST00000461377 TMLHEQ9NVH6 421 aa20.91■□□□□ 0.94
CCM2-203ENST00000461377 COL4A4P53420 1690 aaPredicted RBP20.9■□□□□ 0.94
CCM2-203ENST00000461377 TCRBV9S1A1TA0A576 114 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 EEF2KO00418 725 aaKnown RBP20.9■□□□□ 0.94
CCM2-203ENST00000461377 TRIM66O15016 1216 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 CREB3O43889 395 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 SPAG7O75391 227 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 NCAM1P13591 858 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 MSH2P43246 934 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 MAGEA3P43357 314 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 WDR4P57081 412 aaKnown RBP20.9■□□□□ 0.94
CCM2-203ENST00000461377 YWHAGP61981 247 aaKnown RBP eCLIP20.9■□□□□ 0.94
CCM2-203ENST00000461377 SEMA3BQ13214 749 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 SEMA5AQ13591 1074 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 PRKD1Q15139 912 aaPredicted RBP20.9■□□□□ 0.94
CCM2-203ENST00000461377 DCLRE1AQ6PJP8 1040 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 TRAF7Q6Q0C0 670 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 RFX8Q6ZV50 586 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 ZNF534Q76KX8 674 aa20.9■□□□□ 0.94
CCM2-203ENST00000461377 SCML4Q8N228 414 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms