RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PKP1Q13835 747 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 STILQ15468 1287 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 ANO4Q32M45 955 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 TAPT1Q6NXT6 567 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 FAM173BQ6P4H8 233 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 MAMDC4Q6UXC1 1216 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 CAMKK1Q8N5S9 505 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 PPP1R35Q8TAP8 253 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 TSPEARQ8WU66 669 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 RSAD2Q8WXG1 361 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 SOCS4Q8WXH5 440 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 MVB12AQ96EY5 273 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 ZNF333Q96JL9 665 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 HTATIP2Q9BUP3 242 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 RNF26Q9BY78 433 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 ACE2Q9BYF1 805 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 FAM204AQ9H8W3 233 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 RIC8AQ9NPQ8 531 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 PXMP2Q9NR77 195 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 FBXO40Q9UH90 709 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 PRSS50Q9UI38 385 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 PCDHA6Q9UN73 950 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 DAAM1Q9Y4D1 1078 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 ZNF236Q9UL36 1845 aa5.27□□□□□ -1.57
ATPAF1-203ENST00000460928 NPIPB8E9PQR5 432 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 MATN2O00339 956 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 STRNO43815 780 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 ATP9AO75110 1047 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 TUSC2O75896 110 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 PCDH8O95206 1070 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 TDP2O95551 362 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 MPIG6BO95866 241 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 PGK1P00558 417 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 HMGCRP04035 888 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 HRGP04196 525 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 SETSIPP0DME0 302 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 ARP10275 920 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 CYBAP13498 195 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 CD151P48509 253 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 BCAR1P56945 870 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 IRX1P78414 480 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 IL13RA1P78552 427 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 SP4Q02446 784 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 CUL4AQ13619 759 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 ACVR2BQ13705 512 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 SPIDRQ14159 915 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 DHX8Q14562 1220 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 NOLC1Q14978 699 aaKnown RBP eCLIP5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 EIF4HQ15056 248 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 PGM5Q15124 567 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 ZRSR2Q15696 482 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 LY6KQ17RY6 165 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 PGS1Q32NB8 556 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 WDR72Q3MJ13 1102 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 USP39Q53GS9 565 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 MAP3K21Q5TCX8 1036 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 ARHGEF16Q5VV41 709 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 MFSD14CQ5VZR4 134 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 PIK3AP1Q6ZUJ8 805 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 OVCH2Q7RTZ1 564 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 SLC41A1Q8IVJ1 513 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 BLIDQ8IZY5 108 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 ABRAQ8N0Z2 381 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 AMER2Q8N7J2 671 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 FAM156AQ8NDB6 213 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 OR14C36Q8NHC7 312 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 CALML6Q8TD86 181 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 PARD3BQ8TEW8 1205 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 CUL5Q93034 780 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 FATE1Q969F0 183 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 ZSCAN31Q96LW9 406 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 PDCD2LQ9BRP1 358 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 WDR11Q9BZH6 1224 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 ZMYND12Q9H0C1 365 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 CXorf56Q9H5V9 222 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 GALNT8Q9NY28 637 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 CHMP5Q9NZZ3 219 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 CWC15Q9P013 229 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 ING1Q9UK53 422 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 PHTF1Q9UMS5 762 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 USP18Q9UMW8 372 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 SMC3Q9UQE7 1217 aa5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 MORC2Q9Y6X9 1032 aaPredicted RBP5.26□□□□□ -1.57
ATPAF1-203ENST00000460928 PFASO15067 1338 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 STK36Q9NRP7 1315 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 BAHCC1Q9P281 2608 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 VPS37CA5D8V6 355 aaPredicted RBP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 FAM86B1E9PN63 330 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 H3BML4 177 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 DDX39AO00148 427 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 ARHGAP6O43182 974 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 HTRA2O43464 458 aaPredicted RBP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 CDC14BO60729 498 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 FAM86B2P0C5J1 330 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 ACO1P21399 889 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 EDNRBP24530 442 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 COPB2P35606 906 aa5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 RPS19P39019 145 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-203ENST00000460928 MRPL12P52815 198 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms