RNA–Protein interactions for RNA: ENST00000460331.5

ZNF3-211, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-211ENST00000460331 PIGVQ9NUD9 493 aa12.97□□□□□ -0.33
ZNF3-211ENST00000460331 DDX56Q9NY93 547 aaKnown RBP12.97□□□□□ -0.33
ZNF3-211ENST00000460331 GDE1Q9NZC3 331 aa12.97□□□□□ -0.33
ZNF3-211ENST00000460331 PCSK1NQ9UHG2 260 aa12.97□□□□□ -0.33
ZNF3-211ENST00000460331 ZFP37Q9Y6Q3 630 aaPredicted RBP12.97□□□□□ -0.33
ZNF3-211ENST00000460331 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.96□□□□□ -0.33
ZNF3-211ENST00000460331 MDM4O15151 490 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 FTCDO95954 541 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 TNNT1P13805 278 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 TFE3P19532 575 aaPredicted RBP12.96□□□□□ -0.33
ZNF3-211ENST00000460331 CTNNA2P26232 953 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 CASQ1P31415 396 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 CETN2P41208 172 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 HARS2P49590 506 aaKnown RBP12.96□□□□□ -0.33
ZNF3-211ENST00000460331 EIF4EBP2Q13542 120 aaPredicted RBP12.96□□□□□ -0.33
ZNF3-211ENST00000460331 ERMARDQ5T6L9 678 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 MEI1Q5TIA1 1274 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 FAM131BQ86XD5 332 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 SMRP1Q8NCR6 262 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 ITFG1Q8TB96 612 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 TEKT4Q8WW24 435 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 ING5Q8WYH8 240 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 SLC39A13Q96H72 371 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 C16orf45Q96MC5 204 aaPredicted RBP12.96□□□□□ -0.33
ZNF3-211ENST00000460331 KIF9Q9HAQ2 790 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 LSM7Q9UK45 103 aaKnown RBP12.96□□□□□ -0.33
ZNF3-211ENST00000460331 ARHGAP26Q9UNA1 814 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 ZNF510Q9Y2H8 683 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 SH3BP1Q9Y3L3 701 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 PCDHA3Q9Y5H8 950 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 CPQQ9Y646 472 aa12.96□□□□□ -0.33
ZNF3-211ENST00000460331 CTAGE9A4FU28 777 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 MSI1O43347 362 aaKnown RBP12.95□□□□□ -0.34
ZNF3-211ENST00000460331 ZNF500O60304 480 aaPredicted RBP12.95□□□□□ -0.34
ZNF3-211ENST00000460331 LATS1O95835 1130 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 HMBSP08397 361 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 CEBPBP17676 345 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 CTNNA1P35221 906 aaKnown RBP12.95□□□□□ -0.34
ZNF3-211ENST00000460331 ADRA1BP35368 520 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 RWDD2BP57060 319 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 ZC3H12AQ5D1E8 599 aaKnown RBP12.95□□□□□ -0.34
ZNF3-211ENST00000460331 EFHC2Q5JST6 749 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 STXBP5Q5T5C0 1151 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 OTUD1Q5VV17 481 aaPredicted RBP12.95□□□□□ -0.34
ZNF3-211ENST00000460331 NYAP1Q6ZVC0 841 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 GET4Q7L5D6 327 aaPredicted RBP12.95□□□□□ -0.34
ZNF3-211ENST00000460331 MAP7D3Q8IWC1 876 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 ARFGAP1Q8N6T3 406 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 AZIN2Q96A70 460 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 E2F7Q96AV8 911 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 BTN2A3PQ96KV6 586 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 HAPLN3Q96S86 360 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 NAPGQ99747 312 aaPredicted RBP12.95□□□□□ -0.34
ZNF3-211ENST00000460331 DDX50Q9BQ39 737 aaKnown RBP12.95□□□□□ -0.34
ZNF3-211ENST00000460331 TKTL2Q9H0I9 626 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 GOLPH3Q9H4A6 298 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 ZWILCHQ9H900 591 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 TDP1Q9NUW8 608 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 ARHGEF38Q9NXL2 777 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 DNAI1Q9UI46 699 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 CDH7Q9ULB5 785 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 HYOU1Q9Y4L1 999 aa12.95□□□□□ -0.34
ZNF3-211ENST00000460331 PRRC2BQ5JSZ5 2229 aaKnown RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 H3BQ06 376 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 ZRANB2O95218 330 aaKnown RBP eCLIP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 IGLV3-27P01718 113 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 RARAP10276 462 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 TCF3P15923 654 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 KCNA5P22460 613 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 GBP2P32456 591 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 GJC1P36383 396 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 SLC11A2P49281 568 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 ZNF135P52742 658 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 ATXN1P54253 815 aaKnown RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 TAS2R40P59535 323 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 SLC25A11Q02978 314 aaKnown RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 SMAD4Q13485 552 aaKnown RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 CBX2Q14781 532 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 PDK2Q15119 407 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 CLUL1Q15846 466 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 PUS10Q3MIT2 529 aaKnown RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 OTOP3Q7RTS5 596 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 NPAS3Q8IXF0 933 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 CELF5Q8N6W0 485 aaKnown RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 KIAA1958Q8N8K9 716 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 KCTD6Q8NC69 237 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 ZSCAN18Q8TBC5 510 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 SUSD6Q92537 303 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 FGF13Q92913 245 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 CD101Q93033 1021 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 ACSF2Q96CM8 615 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 HES6Q96HZ4 224 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 RBM41Q96IZ5 413 aaKnown RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 FCRL2Q96LA5 508 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 SLC22A12Q96S37 553 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 SNRNP25Q9BV90 132 aaKnown RBP12.94□□□□□ -0.34
ZNF3-211ENST00000460331 ADAM33Q9BZ11 813 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 GKN1Q9NS71 199 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 SMPD4Q9NXE4 827 aa12.94□□□□□ -0.34
ZNF3-211ENST00000460331 CALCOCO1Q9P1Z2 691 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms