RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 FYB2Q5VWT5 728 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 PEAR1Q5VY43 1037 aaPredicted RBP10.46□□□□□ -0.73
HDLBP-228ENST00000459788 NUGGCQ68CJ6 796 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 RNF43Q68DV7 783 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 ISM2Q6H9L7 571 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 LPCAT2Q7L5N7 544 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 FAM114A1Q8IWE2 563 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 UNC45BQ8IWX7 931 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 NAT16Q8N8M0 369 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 RBBP8NLQ8NC74 664 aaPredicted RBP10.46□□□□□ -0.73
HDLBP-228ENST00000459788 PIWIL1Q96J94 861 aaKnown RBP10.46□□□□□ -0.73
HDLBP-228ENST00000459788 DDX50Q9BQ39 737 aaKnown RBP10.46□□□□□ -0.73
HDLBP-228ENST00000459788 INTS2Q9H0H0 1204 aaKnown RBP10.46□□□□□ -0.73
HDLBP-228ENST00000459788 CD248Q9HCU0 757 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 EVLQ9UI08 416 aaPredicted RBP10.46□□□□□ -0.73
HDLBP-228ENST00000459788 DACH1Q9UI36 760 aa10.46□□□□□ -0.73
HDLBP-228ENST00000459788 AGO1Q9UL18 857 aaKnown RBP10.46□□□□□ -0.73
HDLBP-228ENST00000459788 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.46□□□□□ -0.73
HDLBP-228ENST00000459788 TCRBV21S2A2A0A5A6 115 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 SLC12A8A0AV02 714 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 YJEFN3A6XGL0 299 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 E7ENQ6 273 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 M0QYV0 167 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 RNF225M0QZC1 329 aaPredicted RBP10.45□□□□□ -0.74
HDLBP-228ENST00000459788 TULP2O00295 520 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 BIN1O00499 593 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 MDM4O15151 490 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 CAVIN2O95810 425 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 IGLV3-27P01718 113 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 LTFP02788 710 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 ERCC5P28715 1186 aaPredicted RBP10.45□□□□□ -0.74
HDLBP-228ENST00000459788 GBP1P32455 592 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 SNX16P57768 344 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 MTA1Q13330 715 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 STARD3Q14849 445 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 MAP7D1Q3KQU3 841 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 AASDHQ4L235 1098 aaPredicted RBP10.45□□□□□ -0.74
HDLBP-228ENST00000459788 EMC10Q5UCC4 262 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 PMF1Q6P1K2 205 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 GBP6Q6ZN66 633 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 TPGS1Q6ZTW0 290 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 ANKS1BQ7Z6G8 1248 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 DENND1CQ8IV53 801 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 FMNL3Q8IVF7 1028 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 CHPFQ8IZ52 775 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 UBA3Q8TBC4 463 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 WFIKKN2Q8TEU8 576 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 TFAP2BQ92481 460 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 THAP9Q9H5L6 903 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 FBRSQ9HAH7 460 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 BCCIPQ9P287 314 aaKnown RBP eCLIP10.45□□□□□ -0.74
HDLBP-228ENST00000459788 THAP10Q9P2Z0 257 aaPredicted RBP10.45□□□□□ -0.74
HDLBP-228ENST00000459788 NUDT5Q9UKK9 219 aa10.45□□□□□ -0.74
HDLBP-228ENST00000459788 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.44□□□□□ -0.74
HDLBP-228ENST00000459788 A0A1W2PQF6 199 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 PRRT4C9JH25 899 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 TM4SF5O14894 197 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 AP5Z1O43299 807 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 GLI1P08151 1106 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 GABRG2P18507 467 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 HOXC13P31276 330 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 GPD2P43304 727 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 STX17P56962 302 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 EGFLAMQ63HQ2 1017 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 IL31Q6EBC2 164 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 TRIM65Q6PJ69 517 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 RRAGAQ7L523 313 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 CYP2U1Q7Z449 544 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 KIAA0907Q7Z7F0 614 aaPredicted RBP10.44□□□□□ -0.74
HDLBP-228ENST00000459788 TMEM110Q86TL2 294 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 SYT12Q8IV01 421 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 ARHGEF19Q8IW93 802 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 SFTPA1Q8IWL2 248 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.44□□□□□ -0.74
HDLBP-228ENST00000459788 CEP76Q8TAP6 659 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 IPO4Q8TEX9 1081 aaKnown RBP10.44□□□□□ -0.74
HDLBP-228ENST00000459788 KREMEN1Q96MU8 473 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 SERPINB11Q96P15 392 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 MED15Q96RN5 788 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 ZSWIM1Q9BR11 485 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 SLC4A5Q9BY07 1137 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 TPSD1Q9BZJ3 242 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 CLSTN2Q9H4D0 955 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 UBE2TQ9NPD8 197 aaPredicted RBP10.44□□□□□ -0.74
HDLBP-228ENST00000459788 POLR3BQ9NW08 1133 aaPredicted RBP10.44□□□□□ -0.74
HDLBP-228ENST00000459788 APEX2Q9UBZ4 518 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 HCN2Q9UL51 889 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 NFE2L3Q9Y4A8 694 aa10.44□□□□□ -0.74
HDLBP-228ENST00000459788 MUC22E2RYF6 1773 aaPredicted RBP10.44□□□□□ -0.74
HDLBP-228ENST00000459788 NYNRINQ9P2P1 1898 aaKnown RBP10.43□□□□□ -0.74
HDLBP-228ENST00000459788 KHNYNO15037 678 aaKnown RBP10.43□□□□□ -0.74
HDLBP-228ENST00000459788 MAP3K13O43283 966 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 LCP1P13796 627 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 BRD2P25440 801 aaKnown RBP10.43□□□□□ -0.74
HDLBP-228ENST00000459788 SLC11A2P49281 568 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 CREB5Q02930 508 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 LMAN2Q12907 356 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 MAN2A1Q16706 1144 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 EXOC3L4Q17RC7 722 aa10.43□□□□□ -0.74
HDLBP-228ENST00000459788 STPG1Q5TH74 334 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms