RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 OLFM3Q96PB7 478 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CSPG4P5Q96PW8 444 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 NUDCD1Q96RS6 583 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 C16orf70Q9BSU1 422 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 DHX35Q9H5Z1 703 aaKnown RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 TXNRD2Q9NNW7 524 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 MRGBPQ9NV56 204 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 THAP1Q9NVV9 213 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-202ENST00000459727 NSMCE4AQ9NXX6 385 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 SLC17A7Q9P2U7 560 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 DNAJB4Q9UDY4 337 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 ANGPTL2Q9UKU9 493 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 FZD1Q9UP38 647 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 MAD1L1Q9Y6D9 718 aa9.14□□□□□ -0.95
HDAC3-202ENST00000459727 MAGEB16A2A368 324 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 ADM5C9JUS6 153 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 GOLGA8RI6L899 631 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 PSMD3O43242 534 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 DIAPH2O60879 1101 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 HUS1O60921 280 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 PEX11AO75192 247 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 DGKIO75912 1065 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 SNUPNO95149 360 aaKnown RBP9.13□□□□□ -0.95
HDAC3-202ENST00000459727 KLHL2O95198 593 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 NPTXRO95502 500 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 VTNP04004 478 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 APOA4P06727 396 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 GJB1P08034 283 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 TPBGLP0DKB5 382 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 T-ENOLP0DO92 83 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 GNAZP19086 355 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 MX2P20592 715 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 BGNP21810 368 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 WARSP23381 471 aaKnown RBP9.13□□□□□ -0.95
HDAC3-202ENST00000459727 DNAJB1P25685 340 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 NOS2P35228 1153 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 HCAR3P49019 387 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 PRKAA2P54646 552 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 ILF2Q12905 390 aaKnown RBP9.13□□□□□ -0.95
HDAC3-202ENST00000459727 STX3Q13277 289 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 ORC1Q13415 861 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 NAA25Q14CX7 972 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 TAF5Q15542 800 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 TAF11Q15544 211 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 TRMT5Q32P41 509 aaKnown RBP9.13□□□□□ -0.95
HDAC3-202ENST00000459727 PPP6R3Q5H9R7 873 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-202ENST00000459727 C9orf57Q5W0N0 161 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 TRNP1Q6NT89 227 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 C4orf50Q6ZRC1 276 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 CDR2LQ86X02 465 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-202ENST00000459727 TMPRSS6Q8IU80 811 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 OR6J1Q8NGC5 347 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 KCTD13Q8WZ19 329 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 COPS5Q92905 334 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 UTP4Q969X6 686 aaKnown RBP9.13□□□□□ -0.95
HDAC3-202ENST00000459727 NTAN1Q96AB6 310 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 SERAC1Q96JX3 654 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 VAT1Q99536 393 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 C1orf21Q9H246 121 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 ABHD16BQ9H3Z7 469 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 MOCS1Q9NZB8 636 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 DCTN4Q9UJW0 460 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 LRRC42Q9Y546 428 aa9.13□□□□□ -0.95
HDAC3-202ENST00000459727 WDR91A4D1P6 747 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 KPNA7A9QM74 516 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 SPECC1L-ADORA2AF8WAN1 911 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 PIRO00625 290 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 FCHO1O14526 889 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 SNNO75324 88 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-202ENST00000459727 RFPL1O75677 317 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 CBX6O95503 412 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 C1QAP02745 245 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 SERPINE1P05121 402 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 POLBP06746 335 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 BPGMP07738 259 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 SERPINA6P08185 405 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 MMP3P08254 477 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 RARBP10826 455 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 MYL2P10916 166 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 GNAT1P11488 350 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 SKIP12755 728 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 DARSP14868 501 aaKnown RBP9.12□□□□□ -0.95
HDAC3-202ENST00000459727 ATP6V1C1P21283 382 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 ADORA2AP29274 412 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 EPHB2P29323 1055 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 SERPINB6P35237 376 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 GNL1P36915 607 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-202ENST00000459727 GP5P40197 560 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 VHLP40337 213 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 RGS7P49802 495 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 RAP1GDS1P52306 607 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 GTF2A2P52657 109 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 IRX4P78413 519 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 OCRLQ01968 901 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 GAD2Q05329 585 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 ZNF33AQ06730 810 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 PAFAH1B3Q15102 231 aaKnown RBP9.12□□□□□ -0.95
HDAC3-202ENST00000459727 ARL13BQ3SXY8 428 aa9.12□□□□□ -0.95
HDAC3-202ENST00000459727 CCDC153Q494R4 210 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms