RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 A0A1W2PQH9 124 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 TCRBV5S1A1TA0A578 114 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 SLC12A8A0AV02 714 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 E7EVH7 732 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 C5orf67F2Z3F1 127 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 F5H5T6 163 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 H3BNC9 293 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 APOC4-APOC2K7ER74 178 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 SMAPO00193 183 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 TEX28O15482 410 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 TBC1D4O60343 1298 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 TLR5O60602 858 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 HEXIM1O94992 359 aaKnown RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 CSPG5O95196 566 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 MOCS2O96007 188 aaPredicted RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 APOC2P02655 101 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 C8AP07357 584 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 CA3P07451 260 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 CNPP09543 421 aaKnown RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 MYL4P12829 197 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 HDCP19113 662 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 DDX6P26196 483 aaKnown RBP eCLIP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 EPHB2P29323 1055 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 PTPN7P35236 360 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 GTF2F1P35269 517 aaKnown RBP eCLIP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 CHKAP35790 457 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 ETFBP38117 255 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 HCAR3P49019 387 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 PEX5P50542 639 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 TUBP50607 506 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 RABGGTBP53611 331 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 OXCT1P55809 520 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 EIF3EP60228 445 aaKnown RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 GUCY2DQ02846 1103 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 SNX1Q13596 522 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 CUL1Q13616 776 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 PRPSAP1Q14558 356 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 PDK1Q15118 436 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 SHHQ15465 462 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 TAF5Q15542 800 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 TRIP4Q15650 581 aaPredicted RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 ANO4Q32M45 955 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 ANKRD20A8PQ5CZ79 823 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 SDHAF4Q5VUM1 108 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 SYPL2Q5VXT5 272 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 HEATR6Q6AI08 1181 aaKnown RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 LLGL2Q6P1M3 1020 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 PPP1R21Q6ZMI0 780 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 DNAJB7Q7Z6W7 309 aaPredicted RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 HOOK3Q86VS8 718 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 LRRC49Q8IUZ0 686 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 CDKL3Q8IVW4 592 aaPredicted RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZNF276Q8N554 614 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 TTC16Q8NEE8 873 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZMIZ2Q8NF64 920 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 CMASQ8NFW8 434 aaPredicted RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 GPR152Q8TDT2 470 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 CENPIQ92674 756 aaPredicted RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 ALG3Q92685 438 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 KRT35Q92764 455 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 CD101Q93033 1021 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 PSMG2Q969U7 264 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 NTAN1Q96AB6 310 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 PLD4Q96BZ4 506 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 PPP1R2P1Q96PQ5 205 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 KLHL5Q96PQ7 755 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 PKMYT1Q99640 499 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 CORO1BQ9BR76 489 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 SNRNP25Q9BV90 132 aaKnown RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZBP1Q9H171 429 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 ATXN3LQ9H3M9 355 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 SMOC2Q9H3U7 446 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 RXFP1Q9HBX9 757 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 TRPC7Q9HCX4 862 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 RBM12Q9NTZ6 932 aaKnown RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 CXXC1Q9P0U4 656 aaPredicted RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 GMIPQ9P107 970 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 FZD10Q9ULW2 581 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 DRG1Q9Y295 367 aaKnown RBP6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 YIPF1Q9Y548 306 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 HEY1Q9Y5J3 304 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 PTPRSQ13332 1948 aa6.05□□□□□ -1.44
RNU1-88P-201ENST00000459274 SHROOM3Q8TF72 1996 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 hCG_1818297A0A087WSY0 165 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 CCDC151A5D8V7 595 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 C2orf71A6NGG8 1288 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 GOLGA6L10A6NI86 522 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 SOBPA7XYQ1 873 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 KCNU1A8MYU2 1149 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 HACD1B0YJ81 288 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 HHLA1C9JL84 531 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 AP3B1O00203 1094 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 SLC9A3R1O14745 358 aaPredicted RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 TNFRSF10BO14763 440 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 IRAK2O43187 625 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 PSMD3O43242 534 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 CTIFO43310 598 aaKnown RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 TGM5O43548 720 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 B4GALT3O60512 393 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 ENDOD1O94919 500 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms