RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 XYLT2Q9H1B5 865 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 ASCC2Q9H1I8 757 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 CDT1Q9H211 546 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 FZD8Q9H461 694 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 SMYD3Q9H7B4 428 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 SUDS3Q9H7L9 328 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 C10orf88Q9H8K7 445 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 VRTNQ9H8Y1 702 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 KCNK13Q9HB14 408 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 POPDC2Q9HBU9 364 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 PCDH18Q9HCL0 1135 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 MRPL40Q9NQ50 206 aaKnown RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 XPNPEP3Q9NQH7 507 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 EIF2B3Q9NR50 452 aaKnown RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 FBXO6Q9NRD1 293 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 DDX43Q9NXZ2 648 aaKnown RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 TAS2R1Q9NYW7 299 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 HACD3Q9P035 362 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 SIRPGQ9P1W8 387 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 PIM2Q9P1W9 311 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 CNTN3Q9P232 1028 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 ARMCX1Q9P291 453 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 KANSL3Q9P2N6 904 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 SAE1Q9UBE0 346 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 HACL1Q9UJ83 578 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF112Q9UJU3 913 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 TSPAN16Q9UKR8 245 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 ARHGAP26Q9UNA1 814 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 AP4E1Q9UPM8 1137 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 DNAJC16Q9Y2G8 782 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 DERAQ9Y315 318 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 C2CD2Q9Y426 696 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 RIPK3Q9Y572 518 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 HEY1Q9Y5J3 304 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 CSADQ9Y600 493 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 RAD54BQ9Y620 910 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 COMMD3-BMI1R4GMX3 469 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 SF3B1O75533 1304 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 FER1L6Q2WGJ9 1857 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 A0A0A0MRY4 1105 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 IGKV6-21A0A0C4DH24 114 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SMIM31A0A1B0GVY4 71 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CCDC189A1A4V9 331 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 WDR27A2RRH5 827 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC15A5A6NIM6 579 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ASB14A6NK59 587 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 EIF4E1BA6NMX2 242 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ERI2A8K979 691 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 LACTBL1A8MY62 500 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PRR5-ARHGAP8B1AHC4 643 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 E5RJQ4 531 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLCO1B7G3V0H7 640 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 TXNDC9O14530 226 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC22A2O15244 555 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PSMD3O43242 534 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 MTSS1O43312 755 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 TIMM44O43615 452 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CREB3O43889 395 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CCNT2O60583 730 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SNNO75324 88 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 TBX10O75333 385 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 RFPL1O75677 317 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 LYNP07948 512 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ITGA2BP08514 1039 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 NFICP08651 508 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 UBTFL6P0CB48 400 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CSH1P0DML2 217 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CSH2P0DML3 217 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SRGAP2BP0DMP2 458 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 THRAP10827 490 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 RALBP11234 206 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 FGFR1P11362 822 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 UQCRBP14927 111 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 DPEP1P16444 411 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 NCF2P19878 526 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 EDNRBP24530 442 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 DNAJB2P25686 324 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CRABP2P29373 138 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 TYK2P29597 1187 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CDC25CP30307 473 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GP5P40197 560 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 PNPLA4P41247 253 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GPD2P43304 727 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 RGS7P49802 495 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GMPSP49915 693 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF135P52742 658 aaPredicted RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 NDST1P52848 882 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 BCAT1P54687 386 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 EPHB1P54762 984 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 AIF1P55008 147 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CSE1LP55060 971 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ABCE1P61221 599 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 RPL10AP62906 217 aaKnown RBP3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 COG7P83436 770 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 ARHGAP8P85298 464 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 CDC42EP1Q00587 391 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 SP2Q02086 613 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 GAD2Q05329 585 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 MBTD1Q05BQ5 628 aa3.43□□□□□ -1.86
HMGN1P18-201ENST00000457642 BST2Q10589 180 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms