RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	EIF4H	Q15056	248 aa	Known RBP	13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	GEN1	Q17RS7	908 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	KLHDC10	Q6PID8	442 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	USP49	Q70CQ1	688 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	FAM124A	Q86V42	546 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	CACUL1	Q86Y37	369 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	FUK	Q8N0W3	1084 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	USP28	Q96RU2	1077 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	NRSN2	Q9GZP1	204 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	HSPBP1	Q9NZL4	362 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	NXF1	Q9UBU9	619 aa	Known RBP	13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	AK5	Q9Y6K8	562 aa		13.86	□□□□□ -0.19
SNHG17-208	ENST00000456953	CYSRT1	A8MQ03	144 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	KCNK3	O14649	394 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	PRKCH	P24723	683 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	CD27	P26842	260 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	ATIC	P31939	592 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	CTSK	P43235	329 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	PLA2G4A	P47712	749 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	TRPC3	Q13507	836 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	ZNF234	Q14588	700 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	STK38	Q15208	465 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	SNRNP35	Q16560	246 aa	Known RBP	13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	FYB2	Q5VWT5	728 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	RRAGB	Q5VZM2	374 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	STXBP4	Q6ZWJ1	553 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	ANKS1B	Q7Z6G8	1248 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	SYAP1	Q96A49	352 aa	Predicted RBP	13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	P2RY11	Q96G91	374 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	CGRRF1	Q99675	332 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	XYLT2	Q9H1B5	865 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	CSNK1G1	Q9HCP0	422 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	PANK4	Q9NVE7	773 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	ELOVL2	Q9NXB9	296 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	DNMT3L	Q9UJW3	386 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	SCML2	Q9UQR0	700 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	CLIC4	Q9Y696	253 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	NUMA1	Q14980	2115 aa		13.85	□□□□□ -0.19
SNHG17-208	ENST00000456953	TIMM44	O43615	452 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	RFPL3	O75679	317 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	SEMA4F	O95754	770 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	EPHX1	P07099	455 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	C7	P10643	843 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	ACSL1	P33121	698 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	MYL6	P60660	151 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	IL9R	Q01113	521 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.84	□□□□□ -0.19	3e-7	■□□□□ 10.9
SNHG17-208	ENST00000456953	PSMD6	Q15008	389 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	PCSK4	Q6UW60	755 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	LAYN	Q6UX15	382 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	SERPINA13P	Q6UXR4	307 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	ADAT2	Q7Z6V5	191 aa	Known RBP	13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	ZMIZ2	Q8NF64	920 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	OR2T3	Q8NH03	318 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	CCDC127	Q96BQ5	260 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	BIRC7	Q96CA5	298 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	PIWIL1	Q96J94	861 aa	Known RBP	13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	SMO	Q99835	787 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	LHX5	Q9H2C1	402 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	SMYD3	Q9H7B4	428 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	OSER1	Q9NX31	292 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	ZNF510	Q9Y2H8	683 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	COL12A1	Q99715	3063 aa		13.84	□□□□□ -0.19
SNHG17-208	ENST00000456953	PIEZO2	Q9H5I5	2752 aa		13.83	□□□□□ -0.19
SNHG17-208	ENST00000456953	ERVH48-1	M5A8F1	160 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	ENC1	O14682	589 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	CYP26A1	O43174	497 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	TSPAN3	O60637	253 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	STC2	O76061	302 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	BEST1	O76090	585 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	YEATS4	O95619	227 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	CHKA	P35790	457 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	TXLNA	P40222	546 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	MAP3K7CL	P57077	242 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	TLE3	Q04726	772 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	CYP24A1	Q07973	514 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	CAMK2G	Q13555	558 aa	Predicted RBP	13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	KCNT1	Q5JUK3	1230 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	C10orf120	Q5SQS8	335 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	TADA2B	Q86TJ2	420 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	FGF11	Q92914	225 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	CIPC	Q9C0C6	399 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	BTBD1	Q9H0C5	482 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	VRTN	Q9H8Y1	702 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953	PTPN13	Q12923	2485 aa		13.83	□□□□□ -0.2
SNHG17-208	ENST00000456953		A0A1B0GTQ1	180 aa		13.82	□□□□□ -0.2
SNHG17-208	ENST00000456953	MDM4	O15151	490 aa		13.82	□□□□□ -0.2
SNHG17-208	ENST00000456953	VILL	O15195	856 aa		13.82	□□□□□ -0.2
SNHG17-208	ENST00000456953	FSBP	O95073	299 aa		13.82	□□□□□ -0.2
SNHG17-208	ENST00000456953	LDOC1	O95751	146 aa	Predicted RBP	13.82	□□□□□ -0.2
SNHG17-208	ENST00000456953	KLKB1	P03952	638 aa		13.82	□□□□□ -0.2
SNHG17-208	ENST00000456953	RARG	P13631	454 aa		13.82	□□□□□ -0.2
SNHG17-208	ENST00000456953	NASP	P49321	788 aa	Predicted RBP	13.82	□□□□□ -0.2
SNHG17-208	ENST00000456953	BCAT1	P54687	386 aa		13.82	□□□□□ -0.2
SNHG17-208	ENST00000456953	CLDN6	P56747	220 aa		13.82	□□□□□ -0.2
SNHG17-208	ENST00000456953	C21orf59	P57076	290 aa		13.82	□□□□□ -0.2
SNHG17-208	ENST00000456953	ARID5A	Q03989	594 aa		13.82	□□□□□ -0.2

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