RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 SETSIPP0DME0 302 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 LCP1P13796 627 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 MFAP3P55082 362 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 MORC3Q14149 939 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 PKDCCQ504Y2 493 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 SPDYCQ5MJ68 293 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 KIAA1211LQ6NV74 962 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 LCLAT1Q6UWP7 414 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 IPO4Q8TEX9 1081 aaKnown RBP12.97□□□□□ -0.33
SMCR2-201ENST00000456090 TFAP2BQ92481 460 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 EDEM1Q92611 657 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 KAT5Q92993 513 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 CD248Q9HCU0 757 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 OLA1Q9NTK5 396 aaKnown RBP12.97□□□□□ -0.33
SMCR2-201ENST00000456090 SLC27A6Q9Y2P4 619 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 RAD54BQ9Y620 910 aa12.97□□□□□ -0.33
SMCR2-201ENST00000456090 ZFHX4Q86UP3 3567 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 C4orf47A7E2U8 309 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 WASH3PC4AMC7 463 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 M0QYV0 167 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 RNF225M0QZC1 329 aaPredicted RBP12.96□□□□□ -0.33
SMCR2-201ENST00000456090 PIK3R2O00459 728 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 P4HA2O15460 535 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 AP5Z1O43299 807 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 CYBBP04839 570 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 NDUFV2P19404 249 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 HARS2P49590 506 aaKnown RBP12.96□□□□□ -0.33
SMCR2-201ENST00000456090 RGS7P49802 495 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 STX17P56962 302 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 IRX4P78413 519 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 RPL6Q02878 288 aaKnown RBP12.96□□□□□ -0.33
SMCR2-201ENST00000456090 KCNH2Q12809 1159 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 TRIP4Q15650 581 aaPredicted RBP12.96□□□□□ -0.33
SMCR2-201ENST00000456090 GEN1Q17RS7 908 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 BSPRYQ5W0U4 402 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 LYSMD4Q5XG99 296 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 PMF1Q6P1K2 205 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 FOXR2Q6PJQ5 311 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 RRAGAQ7L523 313 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 FAM217AQ8IXS0 508 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 CPXM2Q8N436 756 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 DEFB119Q8N690 84 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 LMO3Q8TAP4 145 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 DDI1Q8WTU0 396 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 RNF139Q8WU17 664 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 KCTD13Q8WZ19 329 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 CNTNAP3BQ96NU0 1288 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 ZSWIM1Q9BR11 485 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 LSM14BQ9BX40 385 aaKnown RBP12.96□□□□□ -0.33
SMCR2-201ENST00000456090 CNTNAP3Q9BZ76 1288 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 SLC6A17Q9H1V8 727 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 CNGB3Q9NQW8 809 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 ABCC13Q9NSE7 274 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 TMEM74BQ9NUR3 256 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 SFMBT1Q9UHJ3 866 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 CLEC4EQ9ULY5 219 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 CYP8B1Q9UNU6 501 aa12.96□□□□□ -0.33
SMCR2-201ENST00000456090 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.96□□□□□ -0.33
SMCR2-201ENST00000456090 HBS1LQ9Y450 684 aaKnown RBP12.96□□□□□ -0.33
SMCR2-201ENST00000456090 PCDH15Q96QU1 1955 aa12.96□□□□□ -0.34
SMCR2-201ENST00000456090 KMT2BQ9UMN6 2715 aaPredicted RBP12.96□□□□□ -0.34
SMCR2-201ENST00000456090 ATXN2Q99700 1313 aaKnown RBP12.95□□□□□ -0.34
SMCR2-201ENST00000456090 MUC22E2RYF6 1773 aaPredicted RBP12.95□□□□□ -0.34
SMCR2-201ENST00000456090 IGHV1OR15-9A0A0B4J2B8 117 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 GFRA2O00451 464 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 GNA14O95837 355 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 CALCAP01258 141 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 ITPKAP23677 461 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 BRD2P25440 801 aaKnown RBP12.95□□□□□ -0.34
SMCR2-201ENST00000456090 DAOAP59103 153 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 PAK1Q13153 545 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 CNGA2Q16280 664 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 TRIM61Q5EBN2 209 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 DAB2IPQ5VWQ8 1189 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 SLC36A4Q6YBV0 504 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 ANKS1BQ7Z6G8 1248 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 SYT12Q8IV01 421 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 ARHGEF19Q8IW93 802 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 TRIM59Q8IWR1 403 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 RBBP8NLQ8NC74 664 aaPredicted RBP12.95□□□□□ -0.34
SMCR2-201ENST00000456090 SLC35F5Q8WV83 523 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 PIWIL1Q96J94 861 aaKnown RBP12.95□□□□□ -0.34
SMCR2-201ENST00000456090 MRGPRX1Q96LB2 322 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 TMEM9BQ9NQ34 198 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 STON1Q9Y6Q2 735 aa12.95□□□□□ -0.34
SMCR2-201ENST00000456090 KNL1Q8NG31 2342 aa12.94□□□□□ -0.34
SMCR2-201ENST00000456090 NYNRINQ9P2P1 1898 aaKnown RBP12.94□□□□□ -0.34
SMCR2-201ENST00000456090 CDX4O14627 284 aaPredicted RBP12.94□□□□□ -0.34
SMCR2-201ENST00000456090 MSI1O43347 362 aaKnown RBP12.94□□□□□ -0.34
SMCR2-201ENST00000456090 TSPAN3O60637 253 aa12.94□□□□□ -0.34
SMCR2-201ENST00000456090 ZNF217O75362 1048 aa12.94□□□□□ -0.34
SMCR2-201ENST00000456090 GABBR2O75899 941 aa12.94□□□□□ -0.34
SMCR2-201ENST00000456090 KCNK5O95279 499 aa12.94□□□□□ -0.34
SMCR2-201ENST00000456090 HOXD9P28356 352 aaPredicted RBP12.94□□□□□ -0.34
SMCR2-201ENST00000456090 IL12RB1P42701 662 aa12.94□□□□□ -0.34
SMCR2-201ENST00000456090 ZNF132P52740 706 aa12.94□□□□□ -0.34
SMCR2-201ENST00000456090 GCNT1Q02742 428 aa12.94□□□□□ -0.34
SMCR2-201ENST00000456090 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
SMCR2-201ENST00000456090 STARD3Q14849 445 aa12.94□□□□□ -0.34
SMCR2-201ENST00000456090 STILQ15468 1287 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms