RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 SESN1Q9Y6P5 492 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 FPGT-TNNI3KV9GXZ4 949 aa4.68□□□□□ -1.66
HMGB3P21-201ENST00000452483 TRBV23OR9-2A0A075B6M9 112 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 LACTBL1A8MY62 500 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 MYO1GB0I1T2 1018 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 PYCARD-AS1I3L0S3 204 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 SCAMP1O15126 338 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 NKRFO15226 690 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 TP73O15350 636 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLC25A17O43808 307 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 NPHS1O60500 1241 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 HNRNPCL1O60812 293 aaKnown RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 DIAPH2O60879 1101 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 GUCY1B2O75343 617 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 EPN2O95208 641 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 PDE8BO95263 885 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 GCNT3O95395 438 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 GLP2RO95838 553 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 XRCC6P12956 609 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 SYN1P17600 705 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 CCNA2P20248 432 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 PTAFRP25105 342 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 GDI1P31150 447 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 RDXP35241 583 aaKnown RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 SKIV2L2P42285 1042 aaKnown RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 ACAA2P42765 397 aaKnown RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 GALK1P51570 392 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 POLGP54098 1239 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 INHBEP58166 350 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 RTP1P59025 263 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 EIF4A1P60842 406 aaKnown RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 MRPS5P82675 430 aaKnown RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 COG7P83436 770 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 CDC42EP1Q00587 391 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 BEX3Q00994 111 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 MGAT2Q10469 447 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 RAB32Q13637 225 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 CRYMQ14894 314 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 MED22Q15528 200 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF124Q15973 351 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 TRIM71Q2Q1W2 868 aaKnown RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 BTBD16Q32M84 506 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 USP39Q53GS9 565 aaKnown RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 NHSL2Q5HYW2 709 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 RTP2Q5QGT7 225 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 CATSPEREQ5SY80 951 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 ATXN7L2Q5T6C5 722 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 PRAMEF9Q5VWM5 478 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 RCSD1Q6JBY9 416 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 CTR9Q6PD62 1173 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 INO80CQ6PI98 192 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 CRELD2Q6UXH1 353 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 ISLR2Q6UXK2 745 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 NLRX1Q86UT6 975 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 TMEM200AQ86VY9 491 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 MICU3Q86XE3 530 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 PPP1R3BQ86XI6 285 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 CCDC105Q8IYK2 499 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 SYCP3Q8IZU3 236 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 NLGN4XQ8N0W4 816 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 MPP5Q8N3R9 675 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 FAM71DQ8N9W8 422 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 BHLHE22Q8NFJ8 381 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 RASSF8Q8NHQ8 419 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF384Q8TF68 577 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 KCNE4Q8WWG9 221 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 SHISA4Q96DD7 197 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 GIMAP5Q96F15 307 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 RBM14Q96PK6 669 aaKnown RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 TTPALQ9BTX7 342 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLC12A9Q9BXP2 914 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 ACPTQ9BZG2 426 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF518BQ9C0D4 1074 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 INTS2Q9H0H0 1204 aaKnown RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 CHST8Q9H2A9 424 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 CDIP1Q9H305 208 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 IL1RAPL2Q9NP60 686 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 CD93Q9NPY3 652 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 HEYLQ9NQ87 328 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 POLE3Q9NRF9 147 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 SIRT3Q9NTG7 399 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 AP5S1Q9NUS5 200 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 NMRK1Q9NWW6 199 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 BTG4Q9NY30 223 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 MARCH4Q9P2E8 410 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 TNFRSF10DQ9UBN6 386 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 LIMA1Q9UHB6 759 aaKnown RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 PRSS50Q9UI38 385 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZMYND8Q9ULU4 1186 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 USP18Q9UMW8 372 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 TRPV2Q9Y5S1 764 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 TAF6LQ9Y6J9 622 aa4.67□□□□□ -1.66
HMGB3P21-201ENST00000452483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CYP2D7A0A087X1C5 515 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CTAGE15A4D2H0 777 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 NPIPB15A6NHN6 443 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 FADS2P1A8MWK0 482 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 H0YCG3 227 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms