RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 SFMBT1Q9UHJ3 866 aa12.93□□□□□ -0.34
MSH5-209ENST00000450148 RWDD2AQ9UIY3 292 aa12.93□□□□□ -0.34
MSH5-209ENST00000450148 STOML2Q9UJZ1 356 aa12.93□□□□□ -0.34
MSH5-209ENST00000450148 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.93□□□□□ -0.34
MSH5-209ENST00000450148 M0QYV0 167 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 PIK3R2O00459 728 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 IGLV3-27P01718 113 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 LCP1P13796 627 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 HOXB2P14652 356 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 GBP1P32455 592 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 GPD2P43304 727 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 CETN1Q12798 172 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 ENPP2Q13822 863 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 STILQ15468 1287 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 GEN1Q17RS7 908 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 NUDT18Q6ZVK8 323 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 C11orf74Q86VG3 221 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 SIX6OS1Q8N1H7 587 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 IPO4Q8TEX9 1081 aaKnown RBP12.92□□□□□ -0.34
MSH5-209ENST00000450148 HSFY1Q96LI6 401 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 IPO9Q96P70 1041 aaKnown RBP12.92□□□□□ -0.34
MSH5-209ENST00000450148 VPS45Q9NRW7 570 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 ABCC13Q9NSE7 274 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 STRIP2Q9ULQ0 834 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 HBS1LQ9Y450 684 aaKnown RBP12.92□□□□□ -0.34
MSH5-209ENST00000450148 SPTBN2O15020 2390 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 ADAMTS9Q9P2N4 1935 aa12.92□□□□□ -0.34
MSH5-209ENST00000450148 BECN2A8MW95 431 aa12.91□□□□□ -0.34
MSH5-209ENST00000450148 WASH3PC4AMC7 463 aa12.91□□□□□ -0.34
MSH5-209ENST00000450148 MSI1O43347 362 aaKnown RBP12.91□□□□□ -0.34
MSH5-209ENST00000450148 CAVIN2O95810 425 aa12.91□□□□□ -0.34
MSH5-209ENST00000450148 FYNP06241 537 aa12.91□□□□□ -0.34
MSH5-209ENST00000450148 CREB5Q02930 508 aa12.91□□□□□ -0.34
MSH5-209ENST00000450148 AASDHQ4L235 1098 aaPredicted RBP12.91□□□□□ -0.34
MSH5-209ENST00000450148 TMEM215Q68D42 235 aa12.91□□□□□ -0.34
MSH5-209ENST00000450148 IRGQQ8WZA9 623 aa12.91□□□□□ -0.34
MSH5-209ENST00000450148 ACP6Q9NPH0 428 aa12.91□□□□□ -0.34
MSH5-209ENST00000450148 CACNA2D2Q9NY47 1150 aa12.91□□□□□ -0.34
MSH5-209ENST00000450148 RAD54BQ9Y620 910 aa12.91□□□□□ -0.34
MSH5-209ENST00000450148 CNOT1A5YKK6 2376 aaKnown RBP12.9□□□□□ -0.34
MSH5-209ENST00000450148 PATE3B3GLJ2 98 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
MSH5-209ENST00000450148 LATS1O95835 1130 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 LTFP02788 710 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 NDUFV2P19404 249 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 SLC9A1P19634 815 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 HOXD9P28356 352 aaPredicted RBP12.9□□□□□ -0.34
MSH5-209ENST00000450148 APBA1Q02410 837 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 RNF43Q68DV7 783 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 GJB7Q6PEY0 223 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 TRIM65Q6PJ69 517 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 CHPFQ8IZ52 775 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 C12orf50Q8NA57 414 aaPredicted RBP12.9□□□□□ -0.34
MSH5-209ENST00000450148 RNF139Q8WU17 664 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 CRACR2AQ9BSW2 395 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 SLC4A5Q9BY07 1137 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 CLSTN2Q9H4D0 955 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 UBE2TQ9NPD8 197 aaPredicted RBP12.9□□□□□ -0.34
MSH5-209ENST00000450148 CD93Q9NPY3 652 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 CALCOCO1Q9P1Z2 691 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 BCCIPQ9P287 314 aaKnown RBP eCLIP12.9□□□□□ -0.34
MSH5-209ENST00000450148 THAP10Q9P2Z0 257 aaPredicted RBP12.9□□□□□ -0.34
MSH5-209ENST00000450148 CYTH4Q9UIA0 394 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 PCDH15Q96QU1 1955 aa12.9□□□□□ -0.34
MSH5-209ENST00000450148 ASCC3Q8N3C0 2202 aaKnown RBP12.89□□□□□ -0.35
MSH5-209ENST00000450148 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 IGHV1OR15-9A0A0B4J2B8 117 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 LNP1A1A4G5 178 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 IL12RB1P42701 662 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 PTGER3P43115 390 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 DHPSP49366 369 aaPredicted RBP12.89□□□□□ -0.35
MSH5-209ENST00000450148 SGSHP51688 502 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 MEA1Q16626 185 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 SPDYCQ5MJ68 293 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 STPG1Q5TH74 334 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 PEAR1Q5VY43 1037 aaPredicted RBP12.89□□□□□ -0.35
MSH5-209ENST00000450148 DPY19L2P1Q6NXN4 242 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 DENND1BQ6P3S1 775 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 KIAA0907Q7Z7F0 614 aaPredicted RBP12.89□□□□□ -0.35
MSH5-209ENST00000450148 TMEFF1Q8IYR6 380 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 PGBD3Q8N328 593 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 MLKLQ8NB16 471 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 ZNF606Q8WXB4 792 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 ERLEC1Q96DZ1 483 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 SPACA7Q96KW9 195 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 MRGPRX1Q96LB2 322 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 SLC2A11Q9BYW1 496 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 SLC6A17Q9H1V8 727 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 SIX2Q9NPC8 291 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 TMEM74BQ9NUR3 256 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 AJAP1Q9UKB5 411 aaPredicted RBP12.89□□□□□ -0.35
MSH5-209ENST00000450148 STON1Q9Y6Q2 735 aa12.89□□□□□ -0.35
MSH5-209ENST00000450148 NCOR2Q9Y618 2525 aa12.88□□□□□ -0.35
MSH5-209ENST00000450148 GTPBP10A4D1E9 387 aaKnown RBP12.88□□□□□ -0.35
MSH5-209ENST00000450148 PAPSS1O43252 624 aaPredicted RBP12.88□□□□□ -0.35
MSH5-209ENST00000450148 TSPAN3O60637 253 aa12.88□□□□□ -0.35
MSH5-209ENST00000450148 FBXO21O94952 628 aa12.88□□□□□ -0.35
MSH5-209ENST00000450148 CYBBP04839 570 aa12.88□□□□□ -0.35
MSH5-209ENST00000450148 PON1P27169 355 aa12.88□□□□□ -0.35
MSH5-209ENST00000450148 HLA-FP30511 346 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms