RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 KIRREL3Q8IZU9 778 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 GRID1Q9ULK0 1009 aa13.09□□□□□ -0.31
AC006001.3-201ENST00000449307 ANO9A1A5B4 782 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 ITIH2P19823 946 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 PGM1P36871 562 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 ITGA8P53708 1063 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 ARMC12Q5T9G4 340 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 TRMT2AQ8IZ69 625 aaKnown RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 RNF103O00237 685 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 MICAL2O94851 1124 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 ARHGAP17Q68EM7 881 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 EMC1Q8N766 993 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 RXFP2Q8WXD0 754 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 DNMT3LQ9UJW3 386 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 A0A088AWK7 358 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 SLC15A5A6NIM6 579 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 TOMM70O94826 608 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 HLA-DQA2P01906 255 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 ZNF10P21506 573 aaPredicted RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 RASAL3Q86YV0 1011 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 GLMNQ92990 594 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 CAAP1Q9H8G2 361 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 UBA2Q9UBT2 640 aaPredicted RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 TSPAN16Q9UKR8 245 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 UMODL1Q5DID0 1318 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 RECQL4O94761 1208 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 FARP2O94887 1054 aaPredicted RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 MAGEA4P43358 317 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 KCNJ1P48048 391 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 PDK2Q15119 407 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 METTL16Q86W50 562 aaKnown RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 CPA6Q8N4T0 437 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 DPF2Q92785 391 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 RERGQ96A58 199 aaPredicted RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 REXO5Q96IC2 774 aaKnown RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 PHACTR1Q9C0D0 580 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 PTPRAP18433 802 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 WASP42768 502 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 CLK3P49761 638 aaKnown RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 VSNL1P62760 191 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 EXOSC10Q01780 885 aaKnown RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 LRRC36Q1X8D7 754 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 EDRF1Q3B7T1 1238 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 RNF44Q7L0R7 432 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 BRSK2Q8IWQ3 736 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 BPIFA3Q9BQP9 254 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 PIF1Q9H611 641 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 KLHL3Q9UH77 587 aa13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 BARX2Q9UMQ3 279 aaPredicted RBP13.08□□□□□ -0.32
AC006001.3-201ENST00000449307 CAPN1P07384 714 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 ANXA5P08758 320 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 HOXC6P09630 235 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 SERPINA4P29622 427 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 PEX5P50542 639 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 GYS2P54840 703 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 SRSF11Q05519 484 aaKnown RBP13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 RNASE11Q8TAA1 199 aaKnown RBP13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 FERD3LQ96RJ6 166 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 SNX6Q9UNH7 406 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 O00370 1275 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 CLTBP09497 229 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 PPP2R1BP30154 601 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 NPY2RP49146 381 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 PFKPQ01813 784 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 NAB2Q15742 525 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 CCDC81Q6ZN84 652 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 P3H2Q8IVL5 708 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 SAMD3Q8N6K7 520 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 MAB21L3Q8N8X9 362 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 SLC2A14Q8TDB8 520 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 MARCH2Q9P0N8 246 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 DRG1Q9Y295 367 aaKnown RBP13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 NRCAMQ92823 1304 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 CYP2F1P24903 491 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 PTPN11Q06124 597 aaPredicted RBP13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 PPIGQ13427 754 aaKnown RBP eCLIP13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 CSHL1Q14406 222 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 FAM167BQ9BTA0 163 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 EPN3Q9H201 632 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 PRKAG3Q9UGI9 489 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 TMEM150BA6NC51 233 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 HNRNPRO43390 633 aaKnown RBP13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 OR10H2O60403 315 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 PARNO95453 639 aaKnown RBP13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 ATAT1Q5SQI0 421 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 HECTD3Q5T447 861 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 ADSSL1Q8N142 457 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 CHP1Q99653 195 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 PTPRHQ9HD43 1115 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 GRK2P25098 689 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 PLOD1Q02809 727 aaPredicted RBP13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 SPIDRQ14159 915 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 AASDHQ4L235 1098 aaPredicted RBP13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 ERMARDQ5T6L9 678 aa13.07□□□□□ -0.32
AC006001.3-201ENST00000449307 GALNT8Q9NY28 637 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms