RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 GRTP1Q5TC63 336 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CRELD2Q6UXH1 353 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CHMP1BQ7LBR1 199 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 YAF2Q8IY57 180 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 SETD9Q8NE22 299 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 KAT2BQ92831 832 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 TRIM63Q969Q1 353 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 SLC35C1Q96A29 364 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 FBXO28Q9NVF7 368 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 ZSCAN32Q9NX65 697 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 ABI2Q9NYB9 513 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 MEI4A8MW99 385 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 ADARP55265 1226 aaKnown RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CDH18Q13634 790 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 NFIL3Q16649 462 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 PREPLQ4J6C6 727 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 SAMD4BQ5PRF9 694 aaKnown RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 TDRD10Q5VZ19 366 aaKnown RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 C11orf96Q7Z7L8 435 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 TLK2Q86UE8 772 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 SNX32Q86XE0 403 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 C4orf19Q8IY42 314 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 EID3Q8N140 333 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 RNFT2Q96EX2 444 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 CDRT15Q96T59 188 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 C9orf16Q9BUW7 83 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 ELOVL6Q9H5J4 265 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 KRCC1Q9NPI7 259 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 AVENQ9NQS1 362 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 KCNK4Q9NYG8 393 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 PCDHGC5Q9Y5F6 944 aa7.98□□□□□ -1.13
NEDD9-204ENST00000448183 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-204ENST00000448183 AFF2P51816 1311 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 A0A096LPK6 155 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 LRRC10BA6NIK2 292 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ERI2A8K979 691 aaKnown RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 F5H5T6 163 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 DCXO43602 365 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 FAM20BO75063 409 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ATG7O95352 703 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 CPSF4O95639 269 aaKnown RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 TFRCP02786 760 aaKnown RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 SUPT20HL2P0C7V6 817 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 MAPTP10636 758 aaKnown RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 PIK3R1P27986 724 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 RPS7P62081 194 aaKnown RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 CDH17Q12864 832 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 INAQ16352 499 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 DDR2Q16832 855 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 PGS1Q32NB8 556 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 TMEM26Q6ZUK4 368 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ZNF467Q7Z7K2 595 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 STK32CQ86UX6 486 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 RNF148Q8N7C7 305 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ZSWIM2Q8NEG5 633 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ETNPPLQ8TBG4 499 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 GTF3C2Q8WUA4 911 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 CKAP2Q8WWK9 683 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ZNF606Q8WXB4 792 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 DLG3Q92796 817 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 FAM136AQ96C01 138 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ACTR8Q9H981 624 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 PARVBQ9HBI1 364 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 DMAP1Q9NPF5 467 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ATAD3AQ9NVI7 634 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 PRG3Q9Y2Y8 225 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 TPRKBQ9Y3C4 175 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 C15orf38-AP3S2A0A0A6YYH1 394 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 TMEM114B3SHH9 223 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 PROCP04070 461 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 GCNT1Q02742 428 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ILF2Q12905 390 aaKnown RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 POLD3Q15054 466 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 TTMPQ5BVD1 217 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 MFSD7Q6UXD7 560 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 KYAT3Q6YP21 454 aaKnown RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ARPINQ7Z6K5 226 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 SAMD3Q8N6K7 520 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 B3GALNT2Q8NCR0 500 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 PHF21BQ96EK2 531 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 CAMKK2Q96RR4 588 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 SLC25A23Q9BV35 468 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 DPY30Q9C005 99 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 TBC1D13Q9NVG8 400 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 TSC22D2O75157 780 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ASS1P00966 412 aaKnown RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 KRT6AP02538 564 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 KRT6BP04259 564 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 CHRNA5P30532 468 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 TTKP33981 857 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 KRT6CP48668 564 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 FAAP100Q0VG06 881 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ZNF268Q14587 947 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 EXOC3L1Q86VI1 746 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 ZCCHC9Q8N567 271 aaKnown RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 UTP15Q8TED0 518 aaKnown RBP7.97□□□□□ -1.13
NEDD9-204ENST00000448183 AGAP11Q8TF27 550 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 OLFM1Q99784 485 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 APOL4Q9BPW4 351 aa7.97□□□□□ -1.13
NEDD9-204ENST00000448183 PIF1Q9H611 641 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms