RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 STARD7Q9NQZ5 370 aa18.08■□□□□ 0.49
SMC6-206ENST00000446852 DSEQ9UL01 958 aa18.08■□□□□ 0.49
SMC6-206ENST00000446852 MYO16Q9Y6X6 1858 aa18.08■□□□□ 0.48
SMC6-206ENST00000446852 MFSD11O43934 449 aa18.08■□□□□ 0.48
SMC6-206ENST00000446852 DDHD2O94830 711 aa18.08■□□□□ 0.48
SMC6-206ENST00000446852 NCAM1P13591 858 aa18.08■□□□□ 0.48
SMC6-206ENST00000446852 SLC24A5Q71RS6 500 aa18.08■□□□□ 0.48
SMC6-206ENST00000446852 TDRPQ86YL5 185 aa18.08■□□□□ 0.48
SMC6-206ENST00000446852 SRRM1Q8IYB3 904 aaKnown RBP18.08■□□□□ 0.48
SMC6-206ENST00000446852 NETO2Q8NC67 525 aa18.08■□□□□ 0.48
SMC6-206ENST00000446852 RABGEF1Q9UJ41 708 aa18.08■□□□□ 0.48
SMC6-206ENST00000446852 NR2E3Q9Y5X4 410 aa18.08■□□□□ 0.48
SMC6-206ENST00000446852 VWA8A3KMH1 1905 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 AVILO75366 819 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 MPP2Q14168 576 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 EFTUD2Q15029 972 aaKnown RBP eCLIP18.07■□□□□ 0.482e-6■■■□□ 18.3
SMC6-206ENST00000446852 QPCTQ16769 361 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 GLB1LQ6UWU2 654 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 AGGF1Q8N302 714 aaeCLIP18.07■□□□□ 0.48
SMC6-206ENST00000446852 EDEM1Q92611 657 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 CHMP2BQ9UQN3 213 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 FAM72CH0Y354 149 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 EBAG9O00559 213 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 CREB3O43889 395 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 DGKIO75912 1065 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 EFHC2Q5JST6 749 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 FAM72AQ5TYM5 149 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 FAM72DQ6L9T8 149 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 TADA2BQ86TJ2 420 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 FAM72BQ86X60 149 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 PRMT1Q99873 361 aaKnown RBP18.07■□□□□ 0.48
SMC6-206ENST00000446852 ETNK1Q9HBU6 452 aa18.07■□□□□ 0.48
SMC6-206ENST00000446852 HMX1Q9NP08 348 aaPredicted RBP18.07■□□□□ 0.48
SMC6-206ENST00000446852 DMAP1Q9NPF5 467 aaPredicted RBP18.07■□□□□ 0.48
SMC6-206ENST00000446852 PIAS1O75925 651 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 METTL18O95568 372 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 EOMESO95936 686 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 BRAFP15056 766 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 VAV1P15498 845 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 ADRA1BP35368 520 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 ELK3P41970 407 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 DSC1Q08554 894 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 C3orf62Q6ZUJ4 267 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 MRRFQ96E11 262 aaKnown RBP18.06■□□□□ 0.48
SMC6-206ENST00000446852 ZNF317Q96PQ6 595 aaPredicted RBP18.06■□□□□ 0.48
SMC6-206ENST00000446852 SLC9A7Q96T83 725 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 LGMNQ99538 433 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 KLC2Q9H0B6 622 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 TEX264Q9Y6I9 313 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 TET1Q8NFU7 2136 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 H3BRJ5 948 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 GCATO75600 419 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 MAGEA6P43360 314 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 IFNAR2P48551 515 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 DPYSQ14117 519 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 PM20D1Q6GTS8 502 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 MGARPQ8TDB4 240 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 NTAN1Q96AB6 310 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 PGAP3Q96FM1 320 aaPredicted RBP18.06■□□□□ 0.48
SMC6-206ENST00000446852 DDIT4Q9NX09 232 aa18.06■□□□□ 0.48
SMC6-206ENST00000446852 RASA4BC9J798 803 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 RASA4O43374 803 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 APRTP07741 180 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 TYMPP19971 482 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 PAX3P23760 479 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 FAM189BP81408 668 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 SCAPQ12770 1279 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 LRRC14Q15048 493 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 HEATR6Q6AI08 1181 aaKnown RBP18.05■□□□□ 0.48
SMC6-206ENST00000446852 RFX8Q6ZV50 586 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 TRABD2AQ86V40 505 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 FBF1Q8TES7 1133 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 ACSS3Q9H6R3 686 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 KCNK9Q9NPC2 374 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 EEF2KO00418 725 aaKnown RBP18.05■□□□□ 0.48
SMC6-206ENST00000446852 GNRH1P01148 92 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 DRD4P21917 467 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 PHBP35232 272 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 SEMA3BQ13214 749 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 NOMO2Q5JPE7 1267 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 CAND1Q86VP6 1230 aaKnown RBP18.05■□□□□ 0.48
SMC6-206ENST00000446852 PALM2Q8IXS6 379 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 THEM5Q8N1Q8 247 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 SCAMP5Q8TAC9 235 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 TFB1MQ8WVM0 346 aaKnown RBP18.05■□□□□ 0.48
SMC6-206ENST00000446852 CHMP6Q96FZ7 201 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 CCDC134Q9H6E4 229 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 TBC1D13Q9NVG8 400 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 SLC24A2Q9UI40 661 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 FBXW11Q9UKB1 542 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 PCDHB8Q9UN66 801 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 ACTL7BQ9Y614 415 aa18.05■□□□□ 0.48
SMC6-206ENST00000446852 NUP205Q92621 2012 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 SHROOM3Q8TF72 1996 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 C5orf60A6NFR6 353 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 ARVCFO00192 962 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 TSPY1Q01534 308 aa18.04■□□□□ 0.48
SMC6-206ENST00000446852 YWHAHQ04917 246 aaPredicted RBP18.04■□□□□ 0.48
SMC6-206ENST00000446852 PKN2Q16513 984 aaKnown RBP18.04■□□□□ 0.48
SMC6-206ENST00000446852 BSPRYQ5W0U4 402 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms