RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 DTWD2Q8NBA8 298 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 CCDC26Q8TAB7 109 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 SLC39A13Q96H72 371 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 PCDHB18PQ96TA0 734 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 SYT11Q9BT88 431 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 CHRDQ9H2X0 955 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 LMAN1LQ9HAT1 526 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 AGO1Q9UL18 857 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 CAPN11Q9UMQ6 739 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 ATG2BQ96BY7 2078 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 CACNA1IQ9P0X4 2223 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 A0A0A0MRY4 1105 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 IRAK2O43187 625 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 MSI1O43347 362 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 TRUB2O95900 331 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 COL9A1P20849 921 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 GBP1P32455 592 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 MATKP42679 507 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 NSFP46459 744 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 ZBED6P86452 979 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 CDK17Q00537 523 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 MTA1Q13330 715 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 EIF4EBP2Q13542 120 aaPredicted RBP15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 TRIM14Q14142 442 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 TAF5Q15542 800 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 DCAF6Q58WW2 860 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 TAC4Q86UU9 113 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 TMEM25Q86YD3 366 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 PHF13Q86YI8 300 aaPredicted RBP15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 ETFBKMTQ8IXQ9 262 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 XPO6Q96QU8 1125 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 IRF2BPLQ9H1B7 796 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 STAP1Q9ULZ2 295 aa15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 BZW2Q9Y6E2 419 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-210ENST00000442216 CACNG3O60359 315 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 CALB1P05937 261 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 SLC2A3P11169 496 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 TNFAIP3P21580 790 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 SLC11A2P49281 568 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 ANO4Q32M45 955 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 ADGRF1Q5T601 910 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 FAM102AQ5T9C2 384 aaPredicted RBP15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 FSTL4Q6MZW2 842 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 SARM1Q6SZW1 724 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 NT5C3BQ969T7 300 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 VCPIP1Q96JH7 1222 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 FCRL2Q96LA5 508 aaPredicted RBP15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 PNKPQ96T60 521 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 DDX50Q9BQ39 737 aaKnown RBP15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 ANP32EQ9BTT0 268 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 BBS2Q9BXC9 721 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 HAUS4Q9H6D7 363 aa15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.65■□□□□ 0.12e-10■■■■□ 21.3
CSNK1E-210ENST00000442216 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.65■□□□□ 0.11e-8■■□□□ 12.8
CSNK1E-210ENST00000442216 LUC7L2Q9Y383 392 aaKnown RBP15.65■□□□□ 0.1
CSNK1E-210ENST00000442216 MYO18AQ92614 2054 aaKnown RBP15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 GRAP2O75791 330 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 PENKP01210 267 aaPredicted RBP15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 CYBBP04839 570 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 GYPCP04921 128 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 GZMAP12544 262 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 TYRP14679 529 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 C1QBPQ07021 282 aaKnown RBP15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 KLHL30Q0D2K2 578 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 PTP4A2Q12974 167 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 SPECC1LQ69YQ0 1117 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 MMS22LQ6ZRQ5 1243 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 TPGS1Q6ZTW0 290 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 NUDT18Q6ZVK8 323 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 C1orf210Q8IVY1 113 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 SLC30A5Q8TAD4 765 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 PGAP3Q96FM1 320 aaPredicted RBP15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 NPY6RQ99463 290 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 SEPT11Q9NVA2 429 aaKnown RBP15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 ADAM22Q9P0K1 906 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 TMEM59LQ9UK28 342 aa15.64■□□□□ 0.09
CSNK1E-210ENST00000442216 FANCMQ8IYD8 2048 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 NEDD8-MDP1E9PL57 170 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 GFRA2O00451 464 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 ACSL4O60488 711 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 TULP3O75386 442 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 F9P00740 461 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 EGFP01133 1207 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 APOEP02649 317 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 APODP05090 189 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 GRIA2P42262 883 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 PPP2R5DQ14738 602 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 SLC25A52Q3SY17 297 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 MPPE1Q53F39 396 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 FYB2Q5VWT5 728 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 E4F1Q66K89 784 aaPredicted RBP15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 ACAD10Q6JQN1 1059 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 MON1BQ7L1V2 547 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 C12orf40Q86WS4 652 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 VSTM4Q8IW00 320 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 PHTF2Q8N3S3 785 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 SPEM1Q8N4L4 309 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 ATP6V0D2Q8N8Y2 350 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 OLIG1Q8TAK6 271 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 ADAM32Q8TC27 787 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms