RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 IGLV3-27P01718 113 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 HOXB2P14652 356 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 HOXC13P31276 330 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 MPLP40238 635 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 SNX16P57768 344 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 MTA1Q13330 715 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 CAMK4Q16566 473 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 EXOC3L4Q17RC7 722 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 MAP7D1Q3KQU3 841 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 RNF43Q68DV7 783 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 TRIM65Q6PJ69 517 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 LPCAT2Q7L5N7 544 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 TMEM110Q86TL2 294 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 DENND1CQ8IV53 801 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 FMNL3Q8IVF7 1028 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 CHPFQ8IZ52 775 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 KAT5Q92993 513 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 PIWIL1Q96J94 861 aaKnown RBP11.64□□□□□ -0.55
NELFE-205ENST00000441998 MED15Q96RN5 788 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 DDX50Q9BQ39 737 aaKnown RBP11.64□□□□□ -0.55
NELFE-205ENST00000441998 SLC4A5Q9BY07 1137 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 UBE2TQ9NPD8 197 aaPredicted RBP11.64□□□□□ -0.55
NELFE-205ENST00000441998 THAP10Q9P2Z0 257 aaPredicted RBP11.64□□□□□ -0.55
NELFE-205ENST00000441998 APEX2Q9UBZ4 518 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 HCN2Q9UL51 889 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.64□□□□□ -0.55
NELFE-205ENST00000441998 ZNF638Q14966 1978 aaKnown RBP11.64□□□□□ -0.55
NELFE-205ENST00000441998 DCHS1Q96JQ0 3298 aa11.64□□□□□ -0.55
NELFE-205ENST00000441998 DMXL1Q9Y485 3027 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 TCRBV21S2A2A0A5A6 115 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 PRRT4C9JH25 899 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 CAVIN2O95810 425 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 LTFP02788 710 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 GLI1P08151 1106 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 LCP1P13796 627 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 GBP1P32455 592 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 SLC11A2P49281 568 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 ANKS1BQ7Z6G8 1248 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 RABEPKQ7Z6M1 372 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 IRF2BP1Q8IU81 584 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 ARHGEF19Q8IW93 802 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 SFTPA1Q8IWL2 248 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.63□□□□□ -0.55
NELFE-205ENST00000441998 GPT2Q8TD30 523 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 WFIKKN2Q8TEU8 576 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 IPO4Q8TEX9 1081 aaKnown RBP11.63□□□□□ -0.55
NELFE-205ENST00000441998 DDI1Q8WTU0 396 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 ZNF606Q8WXB4 792 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 TMA16Q96EY4 203 aaKnown RBP11.63□□□□□ -0.55
NELFE-205ENST00000441998 LHX5Q9H2C1 402 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 ELOVL2Q9NXB9 296 aa11.63□□□□□ -0.55
NELFE-205ENST00000441998 BCCIPQ9P287 314 aaKnown RBP eCLIP11.63□□□□□ -0.55
NELFE-205ENST00000441998 EVLQ9UI08 416 aaPredicted RBP11.63□□□□□ -0.55
NELFE-205ENST00000441998 DNAH14Q0VDD8 3507 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.62□□□□□ -0.55
NELFE-205ENST00000441998 TM4SF5O14894 197 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 DCLK1O15075 740 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 TRIM24O15164 1050 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 MAP3K13O43283 966 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 AP5Z1O43299 807 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 GABBR2O75899 941 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 KRT5P13647 590 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 BRD2P25440 801 aaKnown RBP11.62□□□□□ -0.55
NELFE-205ENST00000441998 BPIFB4P59827 614 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 STARD3Q14849 445 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 MAN2A1Q16706 1144 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 TPD52L1Q16890 204 aaPredicted RBP11.62□□□□□ -0.55
NELFE-205ENST00000441998 AASDHQ4L235 1098 aaPredicted RBP11.62□□□□□ -0.55
NELFE-205ENST00000441998 PEAR1Q5VY43 1037 aaPredicted RBP11.62□□□□□ -0.55
NELFE-205ENST00000441998 EGFLAMQ63HQ2 1017 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 TOGARAM2Q6ZUX3 1019 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 KIAA0907Q7Z7F0 614 aaPredicted RBP11.62□□□□□ -0.55
NELFE-205ENST00000441998 SYT12Q8IV01 421 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 PGBD3Q8N328 593 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 CEP76Q8TAP6 659 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 HMGB4Q8WW32 186 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 SHC3Q92529 594 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 EDEM1Q92611 657 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 SERPINB11Q96P15 392 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 TPSD1Q9BZJ3 242 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 FBRSQ9HAH7 460 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 ASNSD1Q9NWL6 643 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 PCDHGC3Q9UN70 934 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 TLR6Q9Y2C9 796 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 NFE2L3Q9Y4A8 694 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 NCOR2Q9Y618 2525 aa11.62□□□□□ -0.55
NELFE-205ENST00000441998 HELZP42694 1942 aaKnown RBP11.62□□□□□ -0.55
NELFE-205ENST00000441998 ANTXRLA6NF34 631 aa11.61□□□□□ -0.55
NELFE-205ENST00000441998 KHNYNO15037 678 aaKnown RBP11.61□□□□□ -0.55
NELFE-205ENST00000441998 LETM1O95202 739 aaPredicted RBP11.61□□□□□ -0.55
NELFE-205ENST00000441998 HMBSP08397 361 aa11.61□□□□□ -0.55
NELFE-205ENST00000441998 NCAM1P13591 858 aa11.61□□□□□ -0.55
NELFE-205ENST00000441998 GABRG2P18507 467 aa11.61□□□□□ -0.55
NELFE-205ENST00000441998 PON1P27169 355 aa11.61□□□□□ -0.55
NELFE-205ENST00000441998 GNA15P30679 374 aa11.61□□□□□ -0.55
NELFE-205ENST00000441998 MTIF2P46199 727 aaKnown RBP11.61□□□□□ -0.55
NELFE-205ENST00000441998 RGS7P49802 495 aa11.61□□□□□ -0.55
NELFE-205ENST00000441998 TBX4P57082 545 aa11.61□□□□□ -0.55
NELFE-205ENST00000441998 YWHAZP63104 245 aaKnown RBP11.61□□□□□ -0.55
NELFE-205ENST00000441998 CREB5Q02930 508 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms