RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 TRA2AQ13595 282 aaKnown RBP eCLIP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 DAG1Q14118 895 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 SPIDRQ14159 915 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 NFIXQ14938 502 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 TBCEQ15813 527 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 GRIK4Q16099 956 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 GPR162Q16538 588 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 BCL2A1Q16548 175 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 CYP2A13Q16696 494 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 INSCQ1MX18 579 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 TYSND1Q2T9J0 566 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 HFEQ30201 348 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 HS1BP3Q53T59 392 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 GRTP1Q5TC63 336 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 LIN9Q5TKA1 542 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 GARNL3Q5VVW2 1013 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 BROXQ5VW32 411 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 RRAGBQ5VZM2 374 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 TBC1D9BQ66K14 1250 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 KDM7AQ6ZMT4 941 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 C20orf204Q6ZNR8 217 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 HFE2Q6ZVN8 426 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 OTOAQ7RTW8 1153 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 HDXQ7Z353 690 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 ADSSL1Q8N142 457 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 AGGF1Q8N302 714 aaeCLIP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 SLC43A2Q8N370 569 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 MPP5Q8N3R9 675 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 ZCCHC7Q8N3Z6 543 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 ARFGAP2Q8N6H7 521 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 FAM133AQ8N9E0 248 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 BANPQ8N9N5 519 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 MARCH10Q8NA82 808 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 HIPK4Q8NE63 616 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 NEK11Q8NG66 645 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 OR52M1Q8NGK5 317 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 B4GALNT2Q8NHY0 566 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 URGCPQ8TCY9 931 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 TSPEARQ8WU66 669 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 AFG1LQ8WV93 481 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 LMBR1Q8WVP7 490 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 MAIP1Q8WWC4 291 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 PTPRN2Q92932 1015 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 EXT2Q93063 718 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 RFKQ969G6 155 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 SLC22A18Q96BI1 424 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 COA7Q96BR5 231 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 HDAC11Q96DB2 347 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 PIWIL1Q96J94 861 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 RAB3IPQ96QF0 476 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 UHRF1Q96T88 793 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 RAD9AQ99638 391 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 CGRRF1Q99675 332 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 HNRNPABQ99729 332 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 MDFIQ99750 246 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 CCT7Q99832 543 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 C19orf43Q9BQ61 176 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 ZKSCAN3Q9BRR0 538 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 COLEC11Q9BWP8 271 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 TEX12Q9BXU0 123 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 FTOQ9C0B1 505 aaKnown RBP eCLIP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 CCSER1Q9C0I3 900 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 SMG9Q9H0W8 520 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 RC3H2Q9HBD1 1191 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 IL1RAPL2Q9NP60 686 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 SLC35C2Q9NQQ7 365 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 RAB20Q9NX57 234 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 DDX43Q9NXZ2 648 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 WWOXQ9NZC7 414 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 KLHL9Q9P2J3 617 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 SERPINB13Q9UIV8 391 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 APPL1Q9UKG1 709 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 ITGA11Q9UKX5 1188 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 CNOT11Q9UKZ1 510 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 DSEQ9UL01 958 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 SMG5Q9UPR3 1016 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 GAB2Q9UQC2 676 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 LIPT1Q9Y234 373 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 CHKBQ9Y259 395 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 EXOC6BQ9Y2D4 811 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 R3HDM2Q9Y2K5 976 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 STXBP5LQ9Y2K9 1186 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 PCDHGA5Q9Y5G8 931 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 PCDHA11Q9Y5I1 949 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 DMRT1Q9Y5R6 373 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 POMT1Q9Y6A1 747 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 FPGT-TNNI3KV9GXZ4 949 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 ZNF536O15090 1300 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 IGSF1Q8N6C5 1336 aa4.11□□□□□ -1.75
R3HDM1-209ENST00000441871 A0A0A0MRY4 1105 aa4.1□□□□□ -1.75
R3HDM1-209ENST00000441871 LOC100506127A0A0U1RQW1 187 aa4.1□□□□□ -1.75
R3HDM1-209ENST00000441871 A0A1W2PP55 124 aa4.1□□□□□ -1.75
R3HDM1-209ENST00000441871 TTC26A0AVF1 554 aa4.1□□□□□ -1.75
R3HDM1-209ENST00000441871 DENND3A2RUS2 1198 aa4.1□□□□□ -1.75
R3HDM1-209ENST00000441871 BLACEA4D250 179 aa4.1□□□□□ -1.75
R3HDM1-209ENST00000441871 MEIS3P2A8K0S8 358 aa4.1□□□□□ -1.75
R3HDM1-209ENST00000441871 A8MV72 311 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-209ENST00000441871 KPNA7A9QM74 516 aa4.1□□□□□ -1.75
R3HDM1-209ENST00000441871 F8W8V4 182 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms