RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, human

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-213	ENST00000440293	ADGRG2	Q8IZP9	1017 aa		18.91	■□□□□ 0.62
HDAC7-213	ENST00000440293	WDTC1	Q8N5D0	677 aa		18.91	■□□□□ 0.62
HDAC7-213	ENST00000440293	CD101	Q93033	1021 aa		18.91	■□□□□ 0.62
HDAC7-213	ENST00000440293	MIS12	Q9H081	205 aa		18.91	■□□□□ 0.62
HDAC7-213	ENST00000440293	DUSP15	Q9H1R2	295 aa	Predicted RBP	18.91	■□□□□ 0.62
HDAC7-213	ENST00000440293	PDCL3	Q9H2J4	239 aa		18.91	■□□□□ 0.62
HDAC7-213	ENST00000440293	NLRC4	Q9NPP4	1024 aa		18.91	■□□□□ 0.62
HDAC7-213	ENST00000440293	ABCC13	Q9NSE7	274 aa		18.91	■□□□□ 0.62
HDAC7-213	ENST00000440293	ANAPC1	Q9H1A4	1944 aa		18.91	■□□□□ 0.62
HDAC7-213	ENST00000440293	RALGAPA1	Q6GYQ0	2036 aa		18.91	■□□□□ 0.62
HDAC7-213	ENST00000440293	EPHB6	O15197	1021 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	NFATC1	O95644	943 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	SOX5	P35711	763 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	STAT1	P42224	750 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	PXN	P49023	591 aa	Predicted RBP	18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	COG7	P83436	770 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	SCUBE3	Q8IX30	993 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	RNF139	Q8WU17	664 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	GOLGA1	Q92805	767 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	OTUB2	Q96DC9	234 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	NOX5	Q96PH1	765 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	OLA1	Q9NTK5	396 aa	Known RBP	18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	CYTH4	Q9UIA0	394 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	STRIP2	Q9ULQ0	834 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	CEP83	Q9Y592	693 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	ZFHX4	Q86UP3	3567 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293	OBSL1	O75147	1896 aa		18.9	■□□□□ 0.62
HDAC7-213	ENST00000440293		A0A1B0GTH6	734 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	MDM4	O15151	490 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	SART1	O43290	800 aa	Known RBP	18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	GFPT2	O94808	682 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	KCNK5	O95279	499 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	IRF1	P10914	325 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	HOXC13	P31276	330 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	JAM2	P57087	298 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	SNX16	P57768	344 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	EFEMP1	Q12805	493 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	NR1I3	Q14994	352 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	RNF43	Q68DV7	783 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	HTR3D	Q70Z44	454 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	MIB1	Q86YT6	1006 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	PASD1	Q8IV76	773 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	RXFP3	Q9NSD7	469 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	MARCH2	Q9P0N8	246 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	RASAL2	Q9UJF2	1139 aa		18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	LSM7	Q9UK45	103 aa	Known RBP	18.89	■□□□□ 0.61
HDAC7-213	ENST00000440293	MAP1B	P46821	2468 aa	Known RBP	18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	BCLAF3	A2AJT9	711 aa	Known RBP	18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	LTF	P02788	710 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	FANCC	Q00597	558 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	PDCL	Q13371	301 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	DMC1	Q14565	340 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	LRSAM1	Q6UWE0	723 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	TMEM35B	Q8NCS4	154 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	RPLP0P6	Q8NHW5	317 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	CLEC4C	Q8WTT0	213 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	EDEM1	Q92611	657 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	WBP2	Q969T9	261 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	PPP1R13B	Q96KQ4	1090 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293	TSPY26P	Q9H489	355 aa		18.88	■□□□□ 0.61
HDAC7-213	ENST00000440293		A0A1W2PQC6	194 aa		18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	SLC12A8	A0AV02	714 aa		18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	CNOT1	A5YKK6	2376 aa	Known RBP	18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293		E5RJQ4	531 aa		18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	SCAMP3	O14828	347 aa	Known RBP	18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	USP39	Q53GS9	565 aa	Known RBP	18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	TAF3	Q5VWG9	929 aa		18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	DAB2IP	Q5VWQ8	1189 aa		18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	NOP9	Q86U38	636 aa	Known RBP	18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	ZNF677	Q86XU0	584 aa		18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	C1orf131	Q8NDD1	294 aa	Known RBP	18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	DCLK3	Q9C098	648 aa		18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	USP24	Q9UPU5	2620 aa		18.87	■□□□□ 0.61
HDAC7-213	ENST00000440293	PAPSS1	O43252	624 aa	Predicted RBP	18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	GREM1	O60565	184 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	STC2	O76061	302 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	UBASH3A	P57075	661 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	DHCR24	Q15392	516 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	CCDC6	Q16204	474 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	RHBDF2	Q6PJF5	856 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	BEND5	Q7L4P6	421 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	RASSF3	Q86WH2	238 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	BBS7	Q8IWZ6	715 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	FAM149B1	Q96BN6	582 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	HHIP	Q96QV1	700 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	CPXM1	Q96SM3	734 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	TRIM62	Q9BVG3	475 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	ZNF510	Q9Y2H8	683 aa		18.86	■□□□□ 0.61
HDAC7-213	ENST00000440293	SPAG17	Q6Q759	2223 aa		18.85	■□□□□ 0.61
HDAC7-213	ENST00000440293	LSM8	O95777	96 aa	Known RBP	18.85	■□□□□ 0.61
HDAC7-213	ENST00000440293	HMBS	P08397	361 aa		18.85	■□□□□ 0.61
HDAC7-213	ENST00000440293	CCDC172	P0C7W6	258 aa		18.85	■□□□□ 0.61
HDAC7-213	ENST00000440293	CDH5	P33151	784 aa	Predicted RBP	18.85	■□□□□ 0.61
HDAC7-213	ENST00000440293	HSF5	Q4G112	596 aa	Predicted RBP	18.85	■□□□□ 0.61
HDAC7-213	ENST00000440293	FMNL3	Q8IVF7	1028 aa		18.85	■□□□□ 0.61
HDAC7-213	ENST00000440293	EPS8L1	Q8TE68	723 aa		18.85	■□□□□ 0.61
HDAC7-213	ENST00000440293	IPO4	Q8TEX9	1081 aa	Known RBP	18.85	■□□□□ 0.61
HDAC7-213	ENST00000440293	EZH1	Q92800	747 aa	Predicted RBP	18.85	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms