RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 LILRB3O75022 631 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF189O75820 626 aaPredicted RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 DCNP07585 359 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 CEBPBP17676 345 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ABCB4P21439 1286 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 FGFR3P22607 806 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 FSHRP23945 695 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 GABRR2P28476 465 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 RPL9P32969 192 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 RDXP35241 583 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 GNL1P36915 607 aaPredicted RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 RBP5P82980 135 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ELAVL2Q12926 359 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 TEAD2Q15562 447 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SPDYAQ5MJ70 313 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 TXNDC8Q6A555 127 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 POLNQ7Z5Q5 900 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 VSIG1Q86XK7 387 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 TDRPQ86YL5 185 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ADHFE1Q8IWW8 467 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 RCOR2Q8IZ40 523 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SIX5Q8N196 739 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 THEM5Q8N1Q8 247 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 PPM1KQ8N3J5 372 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ATL2Q8NHH9 583 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 MAGEC3Q8TD91 643 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 FNIP1Q8TF40 1166 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SLC20A1Q8WUM9 679 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 TATDN2Q93075 761 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ACSF2Q96CM8 615 aaPredicted RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 GRAMD1AQ96CP6 724 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SUSD3Q96L08 255 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 RIPOR3Q96MK2 946 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 NCAPGQ9BPX3 1015 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 HERC2P3Q9BVR0 1158 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 NEUROG2Q9H2A3 272 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ASB7Q9H672 318 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SFXN1Q9H9B4 322 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 SENP1Q9P0U3 644 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 CNOT8Q9UFF9 292 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 STRIP2Q9ULQ0 834 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 NDRG2Q9UN36 371 aaKnown RBP4.96□□□□□ -1.62
EDEM3-203ENST00000439962 FAM50BQ9Y247 325 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 INSL5Q9Y5Q6 135 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 NUMBLQ9Y6R0 609 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 BPTFQ12830 3046 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 CFAP47Q6ZTR5 3102 aa4.96□□□□□ -1.62
EDEM3-203ENST00000439962 ESYT3A0FGR9 886 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 MTMR11A4FU01 709 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ZSCAN5CA6NGD5 496 aaPredicted RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 F8VP50 259 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 PIRO00625 290 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 RIPK2O43353 540 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 HLA-DRAP01903 254 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 IRF1P10914 325 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ATF2P15336 505 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 CD19P15391 556 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 POU3F3P20264 500 aaPredicted RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 HOXC13P31276 330 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 NSFP46459 744 aaKnown RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 SOX9P48436 509 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 CCT5P48643 541 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 CACNA2D1P54289 1103 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 TSPY1Q01534 308 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 TNK2Q07912 1038 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 KLF1Q13351 362 aaPredicted RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 CUL2Q13617 745 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ZBTB6Q15916 424 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 KRT71Q3SY84 523 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 SV2CQ496J9 727 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF667Q5HYK9 610 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 CYP4A22Q5TCH4 519 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 GKAP1Q5VSY0 366 aaPredicted RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 TRIM68Q6AZZ1 485 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 PCGF5Q86SE9 256 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 SPATA2LQ8IUW3 424 aaPredicted RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ELMOD1Q8N336 334 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 OTUD6BQ8N6M0 293 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 GBP7Q8N8V2 638 aaPredicted RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 SCAMP5Q8TAC9 235 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 NDRG1Q92597 394 aaKnown RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 SEMA4DQ92854 862 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 KAT5Q92993 513 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF707Q96C28 371 aaPredicted RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 CCDC77Q9BR77 488 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 IMPG2Q9BZV3 1241 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 MIS12Q9H081 205 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 EPB41L4BQ9H329 900 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 PLEKHA5Q9HAU0 1116 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 SSU72Q9NP77 194 aaKnown RBP4.95□□□□□ -1.62
EDEM3-203ENST00000439962 PARVAQ9NVD7 372 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 TAS2R14Q9NYV8 317 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 WDR35Q9P2L0 1181 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 MTRRQ9UBK8 725 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 YIPF1Q9Y548 306 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 ATG2AQ2TAZ0 1938 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 SLC38A8A6NNN8 435 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 H0Y858 1186 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 O00370 1275 aa4.95□□□□□ -1.62
EDEM3-203ENST00000439962 CYP26A1O43174 497 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms