RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 TCHHL1Q5QJ38 904 aaPredicted RBP15.39■□□□□ 0.05
TSC2-206ENST00000439117 NT5DC1Q5TFE4 455 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 TSPAN14Q8NG11 270 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 DDX50Q9BQ39 737 aaKnown RBP15.39■□□□□ 0.05
TSC2-206ENST00000439117 NCKIPSDQ9NZQ3 722 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 E2F8A0AVK6 867 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 CDH3P22223 829 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 LRRC74AQ0VAA2 488 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 CUL2Q13617 745 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 SEZ6Q53EL9 994 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 KCNT1Q5JUK3 1230 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 GJB7Q6PEY0 223 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 BNIPLQ7Z465 357 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 APOPT1Q96IL0 206 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 CACNA2D2Q9NY47 1150 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 TPRKBQ9Y3C4 175 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 RWDD3Q9Y3V2 267 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 IPPQ9Y573 584 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 RPS6KL1Q9Y6S9 549 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 PTPRAP18433 802 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 XIAPP98170 497 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 TAB1Q15750 504 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 KIZQ2M2Z5 673 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 KLHL12Q53G59 568 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 ZNF571Q7Z3V5 609 aaPredicted RBP15.38■□□□□ 0.05
TSC2-206ENST00000439117 DHFR2Q86XF0 187 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 SETD9Q8NE22 299 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 KLHL31Q9H511 634 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 FAM86B1E9PN63 330 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 H3BRB1 525 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 FOXN3O00409 490 aaPredicted RBP15.38■□□□□ 0.05
TSC2-206ENST00000439117 NDUFS3O75489 264 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 LDLRP01130 860 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 HIST1H2AGP0C0S8 130 aaPredicted RBP15.38■□□□□ 0.05
TSC2-206ENST00000439117 FAM86B2P0C5J1 330 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 HIST1H2ADP20671 130 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 TALDO1P37837 337 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 RPL21P46778 160 aaKnown RBP15.38■□□□□ 0.05
TSC2-206ENST00000439117 CASP4P49662 377 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 NFYCQ13952 458 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 CDCA5Q96FF9 252 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 HES6Q96HZ4 224 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 HIST1H2AHQ96KK5 128 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 HIST1H2AJQ99878 128 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 H2AFJQ9BTM1 129 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 TUT1Q9H6E5 874 aaKnown RBP15.38■□□□□ 0.05
TSC2-206ENST00000439117 BTBD3Q9Y2F9 522 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 SDR42E2A6NKP2 422 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 SUPT3HB4E1H0 165 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 GPR182O15218 404 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 RHOBTB1O94844 696 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 ALDH1A1P00352 501 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 ATP6V1B2P21281 511 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 JAK1P23458 1154 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 RAD51Q06609 339 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 FAM45BPQ6NSW5 357 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 FAM117BQ6P1L5 589 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 CCDC33Q8N5R6 958 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 SEMA6BQ9H3T3 888 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 DPP3Q9NY33 737 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 GPRC5DQ9NZD1 345 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 SPATA2Q9UM82 520 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 SUPT7LO94864 414 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 TRAF3Q13114 568 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 EPC2Q52LR7 807 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 PCSK9Q8NBP7 692 aaKnown RBP15.38■□□□□ 0.05
TSC2-206ENST00000439117 SPATA17Q96L03 361 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 PCDH9Q9HC56 1237 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 OSGEPQ9NPF4 335 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 MBD2Q9UBB5 411 aa15.38■□□□□ 0.05
TSC2-206ENST00000439117 ALOX12P18054 663 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 GPD1P21695 349 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 PIK3R1P27986 724 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 LINC00523Q86TU6 105 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 GIPC3Q8TF64 312 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 FARP1Q9Y4F1 1045 aaPredicted RBP15.37■□□□□ 0.05
TSC2-206ENST00000439117 DFFAO00273 331 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 VAV1P15498 845 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 GJA8P48165 433 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 IL5RAQ01344 420 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 PRKAA1Q13131 559 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 AARS2Q5JTZ9 985 aaKnown RBP15.37■□□□□ 0.05
TSC2-206ENST00000439117 NOP9Q86U38 636 aaKnown RBP15.37■□□□□ 0.05
TSC2-206ENST00000439117 ENKURQ8TC29 256 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 QKIQ96PU8 341 aaKnown RBP eCLIP15.37■□□□□ 0.05
TSC2-206ENST00000439117 C6orf62Q9GZU0 229 aaPredicted RBP15.37■□□□□ 0.05
TSC2-206ENST00000439117 VTA1Q9NP79 307 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 ZNF263O14978 683 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 ENTPD5O75356 428 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 GRAP2O75791 330 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 SOAT2O75908 522 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 RPLP2P05387 115 aaKnown RBP15.37■□□□□ 0.05
TSC2-206ENST00000439117 PTPN7P35236 360 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 PSMC6P62333 389 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 NR1D2Q14995 579 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 PDZK1Q5T2W1 519 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 TRIQKQ629K1 86 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 EXOC3L1Q86VI1 746 aa15.37■□□□□ 0.05
TSC2-206ENST00000439117 TDRD5Q8NAT2 981 aaKnown RBP15.37■□□□□ 0.05
TSC2-206ENST00000439117 NINJ2Q9NZG7 142 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms