RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 OR52L2PQ8NGH6 319 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 GLMPQ8WWB7 406 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 RUBCNQ92622 972 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 SDCCAG3Q96C92 435 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 EDC3Q96F86 508 aaKnown RBP4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 HIC2Q96JB3 615 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 SCLT1Q96NL6 688 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 MMS19Q96T76 1030 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 ISCA1Q9BUE6 129 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 ADGRE3Q9BY15 652 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 RNF26Q9BY78 433 aaPredicted RBP4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 BRD8Q9H0E9 1235 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 FSCN3Q9NQT6 498 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 VPS45Q9NRW7 570 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 LIN7CQ9NUP9 197 aaKnown RBP4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 LPAR3Q9UBY5 353 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 ASAP1Q9ULH1 1129 aa4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 C19orf53Q9UNZ5 99 aaPredicted RBP4.33□□□□□ -1.72
LSM1P1-201ENST00000438629 FNDC1Q4ZHG4 1894 aaPredicted RBP4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 CLIC1O00299 241 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 IRAK2O43187 625 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 CER1O95813 267 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 APEHP13798 732 aaKnown RBP4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 KLRK1P26718 216 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 CCT5P48643 541 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 CLK3P49761 638 aaKnown RBP4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 ARL4CP56559 192 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 RPS6KA2Q15349 733 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 CNGA3Q16281 694 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 FAM187BQ17R55 369 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 TUBB8Q3ZCM7 444 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 GLE1Q53GS7 698 aaKnown RBP4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 FCRLBQ6BAA4 426 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 DCDC5Q6ZRR9 648 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 PTF1AQ7RTS3 328 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 AMIGO2Q86SJ2 522 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 OR6Y1Q8NGX8 325 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 MAFAQ8NHW3 353 aaPredicted RBP4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 STT3BQ8TCJ2 826 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 SLC22A17Q8WUG5 538 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 CPT1BQ92523 772 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 REPS1Q96D71 796 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 ZG16BQ96DA0 208 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 REXO5Q96IC2 774 aaKnown RBP4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 FAM167BQ9BTA0 163 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 DDX23Q9BUQ8 820 aaKnown RBP4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 SORBS1Q9BX66 1292 aaKnown RBP4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 PABPC3Q9H361 631 aaKnown RBP4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 CCDC134Q9H6E4 229 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 SAP30LQ9HAJ7 183 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 KCNK9Q9NPC2 374 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 PRDM8Q9NQV8 689 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 TMLHEQ9NVH6 421 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 NDUFAF4Q9P032 175 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 KIF17Q9P2E2 1029 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 GRHPRQ9UBQ7 328 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 ADAM21Q9UKJ8 722 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 CNTN6Q9UQ52 1028 aa4.32□□□□□ -1.72
LSM1P1-201ENST00000438629 CCDC187A0A096LP49 1063 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 LOC102724159A0A0B4J2E5 919 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 NKX2-8O15522 239 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 USP12O75317 370 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 DHRS4L1P0CG22 281 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 HSD3B1P14060 373 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 CST5P28325 142 aaPredicted RBP4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 GALNSP34059 522 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 MCM2P49736 904 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 INHBEP58166 350 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 TUBA4AP68366 448 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 RBM6P78332 1123 aaKnown RBP4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 KCNB1Q14721 858 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 MFSD13AQ14CX5 517 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 LARS2Q15031 903 aaKnown RBP4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 PWP2Q15269 919 aaKnown RBP4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 PFKFB3Q16875 520 aaPredicted RBP4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 SULT6B1Q6IMI4 303 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 WDR93Q6P2C0 686 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 ZNF354CQ86Y25 554 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 SMAP1Q8IYB5 467 aaPredicted RBP4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 FAM98AQ8NCA5 519 aaKnown RBP4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 SRFBP1Q8NEF9 429 aaKnown RBP4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 SEMA6DQ8NFY4 1073 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 HMGB4Q8WW32 186 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 TRAPPC9Q96Q05 1148 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 ELAC1Q9H777 363 aaKnown RBP4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 SEPSECSQ9HD40 501 aaKnown RBP4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 ABHD10Q9NUJ1 306 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 SEMA5BQ9P283 1151 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 BAG5Q9UL15 447 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 ZBTB1Q9Y2K1 713 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 PCDHB7Q9Y5E2 793 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 COX11Q9Y6N1 276 aa4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 POLR2AP24928 1970 aaKnown RBP4.31□□□□□ -1.72
LSM1P1-201ENST00000438629 LOC105369274A0A096LPK9 316 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 LOC102723532A0A0G2JNH3 316 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 TCRBV5S1A1TA0A578 114 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 FAM90A18PA6NE21 464 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 FAM90A16PA6NEW6 464 aa4.3□□□□□ -1.72
LSM1P1-201ENST00000438629 HMX3A6NHT5 357 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms