RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 TRUB2O95900 331 aaKnown RBP17.05■□□□□ 0.32
CTSD-205ENST00000438213 APODP05090 189 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 TNFAIP3P21580 790 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 NOS2P35228 1153 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 PBX1P40424 430 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 NSFP46459 744 aaKnown RBP17.05■□□□□ 0.32
CTSD-205ENST00000438213 SLC6A11P48066 632 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 RNASE9P60153 205 aaKnown RBP17.05■□□□□ 0.32
CTSD-205ENST00000438213 ASIC2Q16515 512 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 GAB4Q2WGN9 574 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 ADGRF1Q5T601 910 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 XYLT1Q86Y38 959 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 SPEM1Q8N4L4 309 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 NAT16Q8N8M0 369 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 DDX50Q9BQ39 737 aaKnown RBP17.05■□□□□ 0.32
CTSD-205ENST00000438213 TTYH3Q9C0H2 523 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 RBM12Q9NTZ6 932 aaKnown RBP17.05■□□□□ 0.32
CTSD-205ENST00000438213 SLC12A6Q9UHW9 1150 aa17.05■□□□□ 0.32
CTSD-205ENST00000438213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.05■□□□□ 0.32
CTSD-205ENST00000438213 MIA3Q5JRA6 1907 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 A0A1W2PQJ5 194 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 NEDD8-MDP1E9PL57 170 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 EGFP01133 1207 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 IGLV3-27P01718 113 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 SLC2A3P11169 496 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 UNGP13051 313 aaPredicted RBP17.04■□□□□ 0.32
CTSD-205ENST00000438213 TYRP14679 529 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 MMP8P22894 467 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 GRIA2P42262 883 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 MTAPQ13126 283 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 PPP2R5DQ14738 602 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 ANGPT1Q15389 498 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 CLEC16AQ2KHT3 1053 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 FAM102AQ5T9C2 384 aaPredicted RBP17.04■□□□□ 0.32
CTSD-205ENST00000438213 PPP1R2P3Q6NXS1 205 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 TAC4Q86UU9 113 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 ADAM32Q8TC27 787 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 PIWIL1Q96J94 861 aaKnown RBP17.04■□□□□ 0.32
CTSD-205ENST00000438213 PCDHB18PQ96TA0 734 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 IRX2Q9BZI1 471 aaPredicted RBP17.04■□□□□ 0.32
CTSD-205ENST00000438213 XPO4Q9C0E2 1151 aaKnown RBP17.04■□□□□ 0.32
CTSD-205ENST00000438213 ARHGEF4Q9NR80 690 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.04■□□□□ 0.32
CTSD-205ENST00000438213 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.04■□□□□ 0.32
CTSD-205ENST00000438213 STOML2Q9UJZ1 356 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 STAP1Q9ULZ2 295 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 COL4A3Q01955 1670 aa17.04■□□□□ 0.32
CTSD-205ENST00000438213 MYOFQ9NZM1 2061 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 A0A0A0MRY4 1105 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 ACSL4O60488 711 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 TULP3O75386 442 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 DAB1O75553 588 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 APOEP02649 317 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 CALB1P05937 261 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 MATKP42679 507 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 CXCL12P48061 93 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 CCR3P51677 355 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 ZBED6P86452 979 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 MTA1Q13330 715 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 MPPE1Q53F39 396 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 NAIF1Q69YI7 327 aaPredicted RBP17.03■□□□□ 0.32
CTSD-205ENST00000438213 MMS22LQ6ZRQ5 1243 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 ETFBKMTQ8IXQ9 262 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 FAM217AQ8IXS0 508 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 PRSS33Q8NF86 280 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 SLC30A5Q8TAD4 765 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 DDI1Q8WTU0 396 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 CPLX3Q8WVH0 158 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 SYN2Q92777 582 aaPredicted RBP17.03■□□□□ 0.32
CTSD-205ENST00000438213 RNF34Q969K3 372 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 TMA16Q96EY4 203 aaKnown RBP17.03■□□□□ 0.32
CTSD-205ENST00000438213 SLC39A13Q96H72 371 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 FAM204AQ9H8W3 233 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 DDIT4Q9NX09 232 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 ADAM22Q9P0K1 906 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 RAPGEFL1Q9UHV5 662 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 CAPN11Q9UMQ6 739 aa17.03■□□□□ 0.32
CTSD-205ENST00000438213 LUC7L2Q9Y383 392 aaKnown RBP17.03■□□□□ 0.32
CTSD-205ENST00000438213 BZW2Q9Y6E2 419 aaKnown RBP17.03■□□□□ 0.32
CTSD-205ENST00000438213 KMT2EQ8IZD2 1858 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 TBC1D3BA6NDS4 549 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 H0Y858 1186 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 GOLGA8SH3BPF8 625 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 IRAK2O43187 625 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 CACNG3O60359 315 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 KAT7O95251 611 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 F9P00740 461 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 PRKCIP41743 596 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 TNFRSF4P43489 277 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 CENPCQ03188 943 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 KLHL30Q0D2K2 578 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 TCF15Q12870 199 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 ZC3H12AQ5D1E8 599 aaKnown RBP17.02■□□□□ 0.32
CTSD-205ENST00000438213 GRAMD4Q6IC98 578 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 SND1Q7KZF4 910 aaKnown RBP eCLIP17.02■□□□□ 0.328e-34■■■■■ 33.2
CTSD-205ENST00000438213 ARCQ7LC44 396 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 PHF13Q86YI8 300 aaPredicted RBP17.02■□□□□ 0.32
CTSD-205ENST00000438213 ATP6V0D2Q8N8Y2 350 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 BHMTQ93088 406 aa17.02■□□□□ 0.32
CTSD-205ENST00000438213 FCRL2Q96LA5 508 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms