RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 NFICP08651 508 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 NFIAQ12857 509 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 CDH18Q13634 790 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 AGKQ53H12 422 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 REXO1L1PQ8IX06 675 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 FAM129BQ96TA1 746 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 REEP1Q9H902 201 aa11.83□□□□□ -0.52
PTCH1-209ENST00000437951 CDK12Q9NYV4 1490 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 RXRBP28702 533 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 MSLNQ13421 630 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 DGKDQ16760 1214 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 AAGABQ6PD74 315 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 FAM220AQ7Z4H9 259 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 MYO1HQ8N1T3 1032 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 PTCD3Q96EY7 689 aaKnown RBP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 RIBC2Q9H4K1 309 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 GTF3C4Q9UKN8 822 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 INPP4BO15327 924 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 NCAM2O15394 837 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 CD4P01730 458 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 RBP3P10745 1247 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 ALDH5A1P51649 535 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 FASTKQ14296 549 aaKnown RBP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 ACAP2Q15057 778 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 TEKT5Q96M29 485 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 TSPAN18Q96SJ8 248 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 FAM118BQ9BPY3 351 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 CELF4Q9BZC1 486 aaKnown RBP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 ABCB10Q9NRK6 738 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 GPRC5DQ9NZD1 345 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 ANAPC2Q9UJX6 822 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 ERGIC3Q9Y282 383 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 CHRM3P20309 590 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 GRK3P35626 688 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 PRR23CQ6ZRP0 262 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 TRPV3Q8NET8 790 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 PUS7LQ9H0K6 701 aaKnown RBP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 TSR3Q9UJK0 312 aaKnown RBP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 SHOC2Q9UQ13 582 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 CHKBQ9Y259 395 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 PLEKHA8P1O95397 391 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 NCAM1P13591 858 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 MYL9P24844 172 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 HPCAL1P37235 193 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 SMIM11AP58511 58 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 OOSP2Q86WS3 158 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 PLCL2Q9UPR0 1127 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 PCP4L1A6NKN8 68 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 ITGA2P17301 1181 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 ST8SIA6P61647 398 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 SGO1Q5FBB7 561 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 TWF2Q6IBS0 349 aaKnown RBP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 SGMS1Q86VZ5 419 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 RAB43Q86YS6 212 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 SPAG16Q8N0X2 631 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 MAGEB10Q96LZ2 347 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 APOL5Q9BWW9 433 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 LRMDAQ9H2I8 198 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 LGR6Q9HBX8 967 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 TBX3O15119 743 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 TMCC2O75069 709 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 GPC1P35052 558 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 SLC16A2P36021 539 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 DALRD3Q5D0E6 543 aaKnown RBP11.82□□□□□ -0.52
PTCH1-209ENST00000437951 OSBP2Q969R2 916 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 GPR63Q9BZJ6 419 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 RAB21Q9UL25 225 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 RPS6KL1Q9Y6S9 549 aa11.82□□□□□ -0.52
PTCH1-209ENST00000437951 PLK4O00444 970 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 PGK1P00558 417 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 ACAD10Q6JQN1 1059 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 PROSER1Q86XN7 944 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 FAM71DQ8N9W8 422 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 FBXO36Q8NEA4 188 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 ACOT12Q8WYK0 555 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 HPS4Q9NQG7 708 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 GIN1Q9NXP7 522 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 SLC12A4Q9UP95 1085 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 CST8O60676 142 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 MZF1P28698 734 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 PTDSS1P48651 473 aaKnown RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 BNIP2Q12982 314 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 CDC16Q13042 620 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 LPIN1Q14693 890 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 PTGES3Q15185 160 aaKnown RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 SPATA2LQ8IUW3 424 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 FAM172AQ8WUF8 416 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 ZC3H10Q96K80 434 aaKnown RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 ELOVL6Q9H5J4 265 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 SSR3Q9UNL2 185 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 PPEF1O14829 653 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 LDOC1O95751 146 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 PIK3CGP48736 1102 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 RHAGQ02094 409 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 CPA5Q8WXQ8 436 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 EPB41L1Q9H4G0 881 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 GPC6Q9Y625 555 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 A0A0G2JPF8 293 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms