RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 TRAPPC3O43617 180 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 APOC2P02655 101 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 TNFRSF8P28908 595 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 ADRA1BP35368 520 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 AARSP49588 968 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC01516-201ENST00000436140 IKBKEQ14164 716 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 GLIPR1L2Q4G1C9 344 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 FNBP1LQ5T0N5 605 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 ALS2CLQ60I27 953 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 DQX1Q8TE96 717 aaKnown RBP11.29□□□□□ -0.6
LINC01516-201ENST00000436140 RNF139Q8WU17 664 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 SEC14L1Q92503 715 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 NPY6RQ99463 290 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 SELENOSQ9BQE4 189 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 APOL2Q9BQE5 337 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 PABPC3Q9H361 631 aaKnown RBP11.29□□□□□ -0.6
LINC01516-201ENST00000436140 GMIPQ9P107 970 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 KANSL3Q9P2N6 904 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 OR12D3Q9UGF7 316 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 TPX2Q9ULW0 747 aaKnown RBP11.29□□□□□ -0.6
LINC01516-201ENST00000436140 THSD7BQ9C0I4 1608 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 MFSD11O43934 449 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 RDXP35241 583 aaKnown RBP11.29□□□□□ -0.6
LINC01516-201ENST00000436140 YWHAGP61981 247 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC01516-201ENST00000436140 TFDP2Q14188 446 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 EFHC2Q5JST6 749 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 DENND5BQ6ZUT9 1274 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 TFAP2DQ7Z6R9 452 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 TAX1BP1Q86VP1 789 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 VIPAS39Q9H9C1 493 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 HOMER3Q9NSC5 361 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 CHMP2BQ9UQN3 213 aa11.29□□□□□ -0.6
LINC01516-201ENST00000436140 SCN5AQ14524 2016 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 H0YGN5 161 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 RIPK2O43353 540 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 TMEM63AO94886 807 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 ERCC2P18074 760 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 COPS2P61201 443 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 TAF10Q12962 218 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 ZDHHC17Q8IUH5 632 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 NPAS4Q8IUM7 802 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 ST13P5Q8NFI4 369 aaPredicted RBP11.28□□□□□ -0.6
LINC01516-201ENST00000436140 CPT1BQ92523 772 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
LINC01516-201ENST00000436140 MED4Q9NPJ6 270 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 CNGB3Q9NQW8 809 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 ARHGEF4Q9NR80 690 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 DTLQ9NZJ0 730 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 PCDHB8Q9UN66 801 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 NFS1Q9Y697 457 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 PPFIA2O75334 1257 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 METTL18O95568 372 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 RPLP2P05387 115 aaKnown RBP11.28□□□□□ -0.6
LINC01516-201ENST00000436140 EN2P19622 333 aaPredicted RBP11.28□□□□□ -0.6
LINC01516-201ENST00000436140 MAGEA4P43358 317 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 PTPN9P43378 593 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 PRMT2P55345 433 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 TPI1P60174 286 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 BTG3Q14201 252 aaPredicted RBP11.28□□□□□ -0.6
LINC01516-201ENST00000436140 PPP2R5DQ14738 602 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 LRRC14Q15048 493 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 SCD5Q86SK9 330 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
LINC01516-201ENST00000436140 PRDM12Q9H4Q4 367 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 IL1RAPL1Q9NZN1 696 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 FZD10Q9ULW2 581 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 MAD1L1Q9Y6D9 718 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 E7EVH7 732 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 DFFAO00273 331 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 ACAP1Q15027 740 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 EFTUD2Q15029 972 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC01516-201ENST00000436140 C4orf50Q6ZRC1 276 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 SPRED2Q7Z698 418 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 KLF6Q99612 283 aaPredicted RBP11.28□□□□□ -0.6
LINC01516-201ENST00000436140 NACA2Q9H009 215 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 PPANQ9NQ55 473 aaKnown RBP11.28□□□□□ -0.6
LINC01516-201ENST00000436140 NDFIP2Q9NV92 336 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 NINJ2Q9NZG7 142 aa11.28□□□□□ -0.6
LINC01516-201ENST00000436140 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 DNALI1O14645 258 aaPredicted RBP11.27□□□□□ -0.61
LINC01516-201ENST00000436140 DAB1O75553 588 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 LRIG2O94898 1065 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 IFNAR2P48551 515 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 DRG2P55039 364 aaKnown RBP11.27□□□□□ -0.61
LINC01516-201ENST00000436140 PDK2Q15119 407 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 NOMO1Q15155 1222 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 C10orf120Q5SQS8 335 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 NCBP2-AS2Q69YL0 99 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 CASC4Q6P4E1 433 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 CES3Q6UWW8 571 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 ARHGAP36Q6ZRI8 547 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 BHLHA9Q7RTU4 235 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 PID1Q7Z2X4 250 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 IGDCC3Q8IVU1 814 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 KCTD13Q8WZ19 329 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 FBXO32Q969P5 355 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 CFAP36Q96G28 342 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 ZBED2Q9BTP6 218 aa11.27□□□□□ -0.61
LINC01516-201ENST00000436140 ETNK1Q9HBU6 452 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms