RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 PDGFRBP09619 1106 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 MYL2P10916 166 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 TSHRP16473 764 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 OSBPP22059 807 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 PTPN4P29074 926 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 HOXA11P31270 313 aaPredicted RBP10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 ABL2P42684 1182 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 CRADDP78560 199 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 POU5F1BQ06416 359 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 PDK2Q15119 407 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 CHSY1Q86X52 802 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 MAP7D3Q8IWC1 876 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 ANKRD13AQ8IZ07 590 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 CCDC185Q8N715 623 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 ABTB1Q969K4 478 aaPredicted RBP10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 SIGLEC10Q96LC7 697 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 RNPEPL1Q9HAU8 725 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 TMPRSS4Q9NRS4 437 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 MAD1L1Q9Y6D9 718 aa10.77□□□□□ -0.68
CLSTN1-203ENST00000435891 BCLAF3A2AJT9 711 aaKnown RBP10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 H3BRB1 525 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 COPEO14579 308 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 TPBGLP0DKB5 382 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 GNAZP19086 355 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 LMO2P25791 158 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 ADORA2AP29274 412 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 L1CAMP32004 1257 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 MROH9Q5TGP6 573 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 TTC39BQ5VTQ0 682 aaPredicted RBP10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 GALNT15Q8N3T1 639 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 PTCD3Q96EY7 689 aaKnown RBP10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 PGLYRP2Q96PD5 576 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 TUT1Q9H6E5 874 aaKnown RBP10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 HESX1Q9UBX0 185 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 DPYSL4O14531 572 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 TGM2P21980 687 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 PRKCHP24723 683 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 ADORA2BP29275 332 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 OR6B3Q8NGW1 331 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 ZNF398Q8TD17 642 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 NUDCD1Q96RS6 583 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 CEP41Q9BYV8 373 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 NMUR2Q9GZQ4 415 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 KLC2Q9H0B6 622 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 PNPLA8Q9NP80 782 aa10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 ADARB2Q9NS39 739 aaKnown RBP10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 MARCOQ9UEW3 520 aaPredicted RBP10.77□□□□□ -0.69
CLSTN1-203ENST00000435891 TPD52L2O43399 206 aaKnown RBP10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 COQ9O75208 318 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 HAUS5O94927 633 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 LCP1P13796 627 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 KLC1Q07866 573 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 BST1Q10588 318 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 LAMC2Q13753 1193 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 KHDC1Q4VXA5 237 aaKnown RBP10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 KCNT2Q6UVM3 1135 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 FBXO27Q8NI29 283 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 FAM49AQ9H0Q0 323 aaPredicted RBP10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 LNPEPQ9UIQ6 1025 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 PLLPQ9Y342 182 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 BPTFQ12830 3046 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 WFS1O76024 890 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 APOEP02649 317 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 SNRPAP09012 282 aaKnown RBP10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 CALB2P22676 271 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 AMPD1P23109 780 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 AKAP5P24588 427 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 GMPRP36959 345 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 MAGEA3P43357 314 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 CPA2P48052 419 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 PITX1P78337 314 aaPredicted RBP10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 IRX4P78413 519 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 CDK16Q00536 496 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 DEUP1Q05D60 604 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 RINLQ6ZS11 566 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 ZCCHC23Q6ZST2 131 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 STK32AQ8WU08 396 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 CDCA5Q96FF9 252 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 KCTD15Q96SI1 283 aaPredicted RBP10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 APOL6Q9BWW8 343 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 MROH8Q9H579 483 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 TLE6Q9H808 572 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 PCMTD2Q9NV79 361 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 SETD4Q9NVD3 440 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 PLXNA1Q9UIW2 1896 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 MDM4O15151 490 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 KITP10721 976 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 VAV1P15498 845 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 GRIK4Q16099 956 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 OXNAD1Q96HP4 312 aaPredicted RBP10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 LGMNQ99538 433 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 ZNF670Q9BS34 389 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 C11orf84Q9BUA3 381 aaPredicted RBP10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 NXF3Q9H4D5 531 aaKnown RBP10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 SAR1AQ9NR31 198 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 IL1RAPL1Q9NZN1 696 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 SCOCQ9UIL1 159 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 KIAA1257Q9ULG3 409 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 ZSWIM8A7E2V4 1837 aa10.76□□□□□ -0.69
CLSTN1-203ENST00000435891 SPTLC1O15269 473 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms