RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 CACNA1EQ15878 2313 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 TRIM49BA6NDI0 452 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 RNF225M0QZC1 329 aaPredicted RBP14.29□□□□□ -0.12
PTPN7-203ENST00000435759 GFRA2O00451 464 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 ZBTB24O43167 697 aaPredicted RBP14.29□□□□□ -0.12
PTPN7-203ENST00000435759 ZNF217O75362 1048 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 ZBED1O96006 694 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 EPB41P11171 864 aaKnown RBP14.29□□□□□ -0.12
PTPN7-203ENST00000435759 CD59P13987 128 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 GFPT1Q06210 699 aaPredicted RBP14.29□□□□□ -0.12
PTPN7-203ENST00000435759 TCERG1LQ5VWI1 586 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 ISM2Q6H9L7 571 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 RSRC2Q7L4I2 434 aaKnown RBP14.29□□□□□ -0.12
PTPN7-203ENST00000435759 ENGASEQ8NFI3 743 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 CEP76Q8TAP6 659 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 EDEM1Q92611 657 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 CAMK1GQ96NX5 476 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 ZSWIM1Q9BR11 485 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 SCNM1Q9BWG6 230 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 TMEM121BQ9BXQ6 578 aaPredicted RBP14.29□□□□□ -0.12
PTPN7-203ENST00000435759 ITM2CQ9NQX7 267 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 ELOVL2Q9NXB9 296 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 ZNF510Q9Y2H8 683 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 COQ4Q9Y3A0 265 aa14.29□□□□□ -0.12
PTPN7-203ENST00000435759 ASCC3Q8N3C0 2202 aaKnown RBP14.29□□□□□ -0.12
PTPN7-203ENST00000435759 YJEFN3A6XGL0 299 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 E7ENQ6 273 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 PIK3R2O00459 728 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 ARHGAP33O14559 1287 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 HYAL3O43820 417 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-203ENST00000435759 CHKAP35790 457 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 CUL2Q13617 745 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 ENPP2Q13822 863 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 TRIP4Q15650 581 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-203ENST00000435759 DCAF17Q5H9S7 520 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-203ENST00000435759 ZNF658Q5TYW1 1059 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-203ENST00000435759 BSPRYQ5W0U4 402 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 TMPRSS6Q8IU80 811 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 FMNL3Q8IVF7 1028 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 ZC3H3Q8IXZ2 948 aaKnown RBP14.28□□□□□ -0.12
PTPN7-203ENST00000435759 RGL4Q8IZJ4 473 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 MINDY1Q8N5J2 469 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 UBR7Q8N806 425 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 DMXL2Q8TDJ6 3036 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 DDI1Q8WTU0 396 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 TFAP2BQ92481 460 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 TOE1Q96GM8 510 aaKnown RBP14.28□□□□□ -0.12
PTPN7-203ENST00000435759 FAXDC2Q96IV6 333 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 CDK5RAP1Q96SZ6 601 aaKnown RBP14.28□□□□□ -0.12
PTPN7-203ENST00000435759 DCLK3Q9C098 648 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 PRDM16Q9HAZ2 1276 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 WSB2Q9NYS7 404 aaPredicted RBP14.28□□□□□ -0.12
PTPN7-203ENST00000435759 TSPAN16Q9UKR8 245 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 LAMA5O15230 3695 aa14.28□□□□□ -0.12
PTPN7-203ENST00000435759 STX10O60499 249 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 NDUFS2O75306 463 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 CD19P15391 556 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 CD44P16070 742 aaKnown RBP14.27□□□□□ -0.13
PTPN7-203ENST00000435759 PRKCHP24723 683 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 CD6P30203 668 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 HOXD12P35452 270 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 SGSHP51688 502 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 COPAP53621 1224 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 ATXN3P54252 364 aaPredicted RBP14.27□□□□□ -0.13
PTPN7-203ENST00000435759 SIM1P81133 766 aaPredicted RBP14.27□□□□□ -0.13
PTPN7-203ENST00000435759 ZNF234Q14588 700 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 UNQ6494/PRO21346Q6UXR6 183 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 FAM217AQ8IXS0 508 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 ARHGAP18Q8N392 663 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 TTC39CQ8N584 583 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 SPATA20Q8TB22 786 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 KAT5Q92993 513 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 GPR174Q9BXC1 333 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 DNAI2Q9GZS0 605 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 ZMIZ1Q9ULJ6 1067 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 STRIP2Q9ULQ0 834 aa14.27□□□□□ -0.13
PTPN7-203ENST00000435759 GOLGA6L7A0A1B0GV03 622 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 UPK3BL1B0FP48 263 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 UPK3BL2E5RIL1 263 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 XPO1O14980 1071 aaKnown RBP14.26□□□□□ -0.13
PTPN7-203ENST00000435759 MSI1O43347 362 aaKnown RBP14.26□□□□□ -0.13
PTPN7-203ENST00000435759 SH3BP5O60239 455 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 OPHN1O60890 802 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 HLA-EP13747 358 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 LCP1P13796 627 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 DPP6P42658 865 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 RGS7P49802 495 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 TPMTP51580 245 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 FKBP3Q00688 224 aaKnown RBP14.26□□□□□ -0.13
PTPN7-203ENST00000435759 ADIGQ0VDE8 80 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 PLEKHG6Q3KR16 790 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 PKDCCQ504Y2 493 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 SGO2Q562F6 1265 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 PMF1Q6P1K2 205 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 METTL3Q86U44 580 aaKnown RBP14.26□□□□□ -0.13
PTPN7-203ENST00000435759 CPXM2Q8N436 756 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 CYB5D2Q8WUJ1 264 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 GATA6Q92908 595 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 SLC35C1Q96A29 364 aa14.26□□□□□ -0.13
PTPN7-203ENST00000435759 CIPCQ9C0C6 399 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms