RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 TEX44Q53QW1 395 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 CATSPER4Q7RTX7 472 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 CADM1Q9BY67 442 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 DENND2DQ9H6A0 471 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 CDHR5Q9HBB8 845 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 SETD4Q9NVD3 440 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 MORF4L1Q9UBU8 362 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 HES2Q9Y543 173 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 A0A0A0MRY4 1105 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 RPSAP08865 295 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 TPBGLP0DKB5 382 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 MLNP12872 115 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 VAV1P15498 845 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 CRHR1P34998 444 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 OCRLQ01968 901 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 DGKDQ16760 1214 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 NBPF20Q3BBV1 942 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 XKR4Q5GH76 650 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 GLRA4Q5JXX5 417 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 FBXO47Q5MNV8 452 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 ANKRD20A2Q5SQ80 823 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 ANKRD20A1Q5TYW2 823 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 ANKRD20A3Q5VUR7 823 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 CES4AQ5XG92 561 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 USP50Q70EL3 339 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 PSTKQ8IV42 348 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 CFAP61Q8NHU2 1237 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 PRR11Q96HE9 360 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 SPATA13Q96N96 652 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 TRIM56Q9BRZ2 755 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 BTBD10Q9BSF8 475 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 NXF3Q9H4D5 531 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 FBXO6Q9NRD1 293 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 KCNK4Q9NYG8 393 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 RNF181Q9P0P0 153 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 SLC45A1Q9Y2W3 748 aa16.62■□□□□ 0.25
HLA-DQB2-231ENST00000435145 PDCD11Q14690 1871 aaKnown RBP16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 SPTLC1O15269 473 aa16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 CD4P01730 458 aa16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 DARSP14868 501 aaKnown RBP16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 LMO2P25791 158 aa16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 CNTFP26441 200 aa16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 ADORA2BP29275 332 aa16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 FDFT1P37268 417 aa16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 GRIA1P42261 906 aa16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 BST1Q10588 318 aa16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 BMPR2Q13873 1038 aa16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 HSF5Q4G112 596 aaPredicted RBP16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 HEATR6Q6AI08 1181 aaKnown RBP16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 BNIPLQ7Z465 357 aa16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 EIF2B3Q9NR50 452 aaKnown RBP16.61■□□□□ 0.25
HLA-DQB2-231ENST00000435145 MBLAC1A4D2B0 266 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 BIRC5O15392 142 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 SNNO75324 88 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 MYL2P10916 166 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 NEFHP12036 1026 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 KCNE1P15382 129 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 AMPD1P23109 780 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 GNL1P36915 607 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 MATKP42679 507 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 DBN1Q16643 649 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 ATG16L1Q676U5 607 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 C4orf50Q6ZRC1 276 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 MARK2Q7KZI7 788 aaKnown RBP16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 HACE1Q8IYU2 909 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 ARMC2Q8NEN0 867 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 OR6J1Q8NGC5 347 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 TFB1MQ8WVM0 346 aaKnown RBP16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 HTR3CQ8WXA8 447 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 E2F7Q96AV8 911 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 TSPAN18Q96SJ8 248 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 MECRQ9BV79 373 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 FZD10Q9ULW2 581 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 MFHAS1Q9Y4C4 1052 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 MAD1L1Q9Y6D9 718 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 FAM237BA0A1B0GVD1 139 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 SMIM35A0A1B0GVV1 85 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 KPNA7A9QM74 516 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 I3L4J1 428 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 FCHO1O14526 889 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 LCP1P13796 627 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 GOT1P17174 413 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 PNPLA4P41247 253 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 SLC25A52Q3SY17 297 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 EFHC1Q5JVL4 640 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 STXBP5Q5T5C0 1151 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 OTUD1Q5VV17 481 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 GPATCH11Q8N954 259 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 NT5C3BQ969T7 300 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 MAML3Q96JK9 1138 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 ZNF560Q96MR9 790 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 NUDCD1Q96RS6 583 aa16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 FAM49AQ9H0Q0 323 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB2-231ENST00000435145 SF3B1O75533 1304 aaKnown RBP eCLIP16.59■□□□□ 0.25
HLA-DQB2-231ENST00000435145 SMIM28A0A1B0GU29 152 aa16.59■□□□□ 0.25
HLA-DQB2-231ENST00000435145 PDHXO00330 501 aa16.59■□□□□ 0.25
HLA-DQB2-231ENST00000435145 XPO1O14980 1071 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB2-231ENST00000435145 GSC2O15499 205 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms