RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ABHD15Q6UXT9 468 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 ZBED8Q8IZ13 594 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 PRICKLE1Q96MT3 831 aaPredicted RBP3.88□□□□□ -1.79
SHPRH-205ENST00000433355 AIFM3Q96NN9 605 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 TRIB3Q96RU7 358 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 SH3GL3Q99963 347 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 C11orf70Q9BRQ4 267 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 LARP6Q9BRS8 491 aaKnown RBP3.88□□□□□ -1.79
SHPRH-205ENST00000433355 SEC14L4Q9UDX3 406 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 E7ESA3 106 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 AKR1A1P14550 325 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 VHLP40337 213 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 MAGEA4P43358 317 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 GABRB2P47870 512 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 MESDQ14696 234 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF571Q7Z3V5 609 aaPredicted RBP3.88□□□□□ -1.79
SHPRH-205ENST00000433355 RAB42Q8N4Z0 105 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 ARRDC4Q8NCT1 418 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 RNF139Q8WU17 664 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 THRSPQ92748 146 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 AZIN2Q96A70 460 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 SLC4A5Q9BY07 1137 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 EPB41L1Q9H4G0 881 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 SMURF2Q9HAU4 748 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 KCNK9Q9NPC2 374 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 ENTPD7Q9NQZ7 604 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.88□□□□□ -1.79
SHPRH-205ENST00000433355 POLG2Q9UHN1 485 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 SAC3D1A6NKF1 404 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 SNAP91O60641 907 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 GPC4O75487 556 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 SERPINA6P08185 405 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 RARBP10826 455 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 IDO1P14902 403 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 PSMA4P25789 261 aaKnown RBP3.88□□□□□ -1.79
SHPRH-205ENST00000433355 GP5P40197 560 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 ARSEP51690 589 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 ARFIP2P53365 341 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 GEMP55040 296 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 PDCLQ13371 301 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 DPYSL2Q16555 572 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 SETD9Q8NE22 299 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 PIGOQ8TEQ8 1089 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 BTBD6Q96KE9 485 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 PNKPQ96T60 521 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 MMP19Q99542 508 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 YTHDF1Q9BYJ9 559 aaKnown RBP3.88□□□□□ -1.79
SHPRH-205ENST00000433355 ZSCAN32Q9NX65 697 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 STX18Q9P2W9 335 aaKnown RBP3.88□□□□□ -1.79
SHPRH-205ENST00000433355 TAGLN3Q9UI15 199 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 LSM7Q9UK45 103 aaKnown RBP3.88□□□□□ -1.79
SHPRH-205ENST00000433355 NENFQ9UMX5 172 aa3.88□□□□□ -1.79
SHPRH-205ENST00000433355 H7C0S8 307 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SMIM24O75264 130 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ZSWIM7Q19AV6 140 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TIMM50Q3ZCQ8 353 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 RETSATQ6NUM9 610 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 MAMDC4Q6UXC1 1216 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TFB1MQ8WVM0 346 aaKnown RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 OTUB2Q96DC9 234 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SEC16BQ96JE7 1060 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF184Q99676 751 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ZBTB24O43167 697 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 IRAK2O43187 625 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ATG7O95352 703 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 KRT4P19013 534 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ARL2P36404 184 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 GLUD2P49448 558 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 HMGCS2P54868 508 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 HERVK_113P62684 666 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ERVK-9P63128 1117 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TMPRSS15P98073 1019 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 DPYSQ14117 519 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TAF12Q16514 161 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PARP15Q460N3 678 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 IRGCQ6NXR0 463 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TRABD2AQ86V40 505 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CPXCR1Q8N123 301 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 NKAPQ8N5F7 415 aaKnown RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PIWIL2Q8TC59 973 aaKnown RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 E2F7Q96AV8 911 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 FGD4Q96M96 766 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 NMRAL1Q9HBL8 299 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ZDHHC4Q9NPG8 344 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ASB3Q9Y575 518 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 A0A087X1B8 175 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 DEAF1O75398 565 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CRCPO75575 148 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 COPZ1P61923 177 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PAF1Q8N7H5 531 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 SH2D3AQ9BRG2 576 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 PITHD1Q9GZP4 211 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ASCC2Q9H1I8 757 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 ETNK1Q9HBU6 452 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 TRPM5Q9NZQ8 1165 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CPSF3Q9UKF6 684 aaKnown RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 IGKV6-21A0A0C4DH24 114 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 FOXN3O00409 490 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 NVLO15381 856 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms