RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 WDR78Q5VTH9 848 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 KRT80Q6KB66 452 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 ATG14Q6ZNE5 492 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 AHI1Q8N157 1196 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 NLRP7Q8WX94 980 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 ERLEC1Q96DZ1 483 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 OXCT2Q9BYC2 517 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 COA1Q9GZY4 146 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 TDRD3Q9H7E2 651 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 SSX2IPQ9Y2D8 614 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 MYH9P35579 1960 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 HMX2A2RU54 273 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 STX16-NPEPL1H3BU86 382 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 EXTL3O43909 919 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 OATP04181 439 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 THRAP10827 490 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 RPL10P27635 214 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 RBL1P28749 1068 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 CDH15P55291 814 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 FAM98CQ17RN3 349 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 MBLAC2Q68D91 279 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 TNS4Q8IZW8 715 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 ATP2A3Q93084 1043 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 CDCA7Q9BWT1 371 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 POPDC2Q9HBU9 364 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 AGO4Q9HCK5 861 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 ZNF358Q9NW07 568 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 CCPG1Q9ULG6 757 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 CNTNAP4Q9C0A0 1308 aa11.91□□□□□ -0.5
HMGCS1-202ENST00000433297 TRIM43BA6NCK2 446 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 BTBD19C9JJ37 291 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 FBXO21O94952 628 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 FGF3P11487 239 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 TSHRP16473 764 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 MIPP30301 263 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 MLH1P40692 756 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 GRIA1P42261 906 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 THOP1P52888 689 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 PRAMEP78395 509 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 SLC25A11Q02978 314 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 KLF10Q13118 480 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 KCNJ11Q14654 390 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 POTEAQ6S8J7 498 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 ARCQ7LC44 396 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 ANKRD23Q86SG2 305 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 SNX32Q86XE0 403 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 THNSL1Q8IYQ7 743 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 LILRA2Q8N149 483 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 SMYD1Q8NB12 490 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 TCHPQ9BT92 498 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 COG4Q9H9E3 785 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 WNK3Q9BYP7 1800 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 TPP1O14773 563 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 BIRC5O15392 142 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 XPOTO43592 962 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 BBOX1O75936 387 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 HSPA4LO95757 839 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 ZBED1O96006 694 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 AMHP03971 560 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 F7P08709 466 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 ADGRE1Q14246 886 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 SH3PXD2AQ5TCZ1 1133 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 NXNQ6DKJ4 435 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 POTEHQ6S545 545 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 C15orf39Q6ZRI6 1047 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 WDTC1Q8N5D0 677 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 TFAP2BQ92481 460 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 MAML3Q96JK9 1138 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 SERPINI1Q99574 410 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 PAIP1Q9H074 479 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 WDR55Q9H6Y2 383 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 GABBR1Q9UBS5 961 aa11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 NXF1Q9UBU9 619 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-202ENST00000433297 RALBP11234 206 aa11.9□□□□□ -0.51
HMGCS1-202ENST00000433297 EIF4BP23588 611 aaKnown RBP11.9□□□□□ -0.51
HMGCS1-202ENST00000433297 SLC9B1Q4ZJI4 515 aa11.9□□□□□ -0.51
HMGCS1-202ENST00000433297 RAB6CQ53S08 254 aa11.9□□□□□ -0.51
HMGCS1-202ENST00000433297 FSCBQ5H9T9 825 aa11.9□□□□□ -0.51
HMGCS1-202ENST00000433297 CAND1Q86VP6 1230 aaKnown RBP11.9□□□□□ -0.51
HMGCS1-202ENST00000433297 TMA16Q96EY4 203 aaKnown RBP11.9□□□□□ -0.51
HMGCS1-202ENST00000433297 RAB6CQ9H0N0 254 aa11.9□□□□□ -0.51
HMGCS1-202ENST00000433297 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.51
HMGCS1-202ENST00000433297 SLC15A5A6NIM6 579 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 LRRIQ4A6NIV6 560 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 GRAP2O75791 330 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 TBXAS1P24557 533 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 ARRB2P32121 409 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 MS4A2Q01362 244 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 DENND1BQ6P3S1 775 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 HHIPL2Q6UWX4 724 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 CLVS1Q8IUQ0 354 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 CHURC1Q8WUH1 139 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 TMEM174Q8WUU8 243 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 MARK4Q96L34 752 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 MSTO1Q9BUK6 570 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 NUF2Q9BZD4 464 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 KLC2Q9H0B6 622 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 ZNF696Q9H7X3 374 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms