RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 TEX28O15482 410 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 CLDN3O15551 220 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 T-ENOLP0DO92 83 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 FOXN2P32314 431 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 BPIFB4P59827 614 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 PPP1R7Q15435 360 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 OASLQ15646 514 aaKnown RBP9.96□□□□□ -0.82
NEDD1-203ENST00000429527 ACCSLQ4AC99 568 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 CHSY1Q86X52 802 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 BRSK2Q8IWQ3 736 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 STAMBPL1Q96FJ0 436 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 CLSTN3Q9BQT9 956 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 IKZF4Q9H2S9 585 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 RNPEPL1Q9HAU8 725 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 KIAA1586Q9HCI6 787 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 BCCIPQ9P287 314 aaKnown RBP eCLIP9.96□□□□□ -0.82
NEDD1-203ENST00000429527 INPP5FQ9Y2H2 1132 aa9.96□□□□□ -0.82
NEDD1-203ENST00000429527 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.95□□□□□ -0.82
NEDD1-203ENST00000429527 ANHXE9PGG2 379 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 K7ENM7 598 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 DNALI1O14645 258 aaPredicted RBP9.95□□□□□ -0.82
NEDD1-203ENST00000429527 THAP12O43422 761 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 PEX11AO75192 247 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 DCTN3O75935 186 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 LMNAP02545 664 aaKnown RBP9.95□□□□□ -0.82
NEDD1-203ENST00000429527 ITGAVP06756 1048 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 ABCB4P21439 1286 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 DNA2P51530 1060 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 ITGA8P53708 1063 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 CYP24A1Q07973 514 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 SMARCB1Q12824 385 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 SURF1Q15526 300 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 ZKSCAN8Q15776 578 aaPredicted RBP9.95□□□□□ -0.82
NEDD1-203ENST00000429527 CCDC38Q502W7 563 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 MAEAQ7L5Y9 396 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 SLC47A2Q86VL8 602 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 RNF169Q8NCN4 708 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 C2orf15Q8WU43 125 aaKnown RBP9.95□□□□□ -0.82
NEDD1-203ENST00000429527 RMDN2Q96LZ7 410 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 WDR6Q9NNW5 1121 aaKnown RBP9.95□□□□□ -0.82
NEDD1-203ENST00000429527 CD320Q9NPF0 282 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 C11orf16Q9NQ32 467 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 FGFR1OP2Q9NVK5 253 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 BARX2Q9UMQ3 279 aaPredicted RBP9.95□□□□□ -0.82
NEDD1-203ENST00000429527 NAALADL1Q9UQQ1 740 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.95□□□□□ -0.82
NEDD1-203ENST00000429527 OR1G1P47890 313 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 CLCN2P51788 898 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 SH2D5Q6ZV89 423 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 GPIHBP1Q8IV16 184 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 UBALD2Q8IYN6 164 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 FBXL13Q8NEE6 735 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 NSMCE1Q8WV22 266 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 FAM136AQ96C01 138 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 SELENOSQ9BQE4 189 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 ASB3Q9Y575 518 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 HELZP42694 1942 aaKnown RBP9.95□□□□□ -0.82
NEDD1-203ENST00000429527 TCF20Q9UGU0 1960 aaKnown RBP9.95□□□□□ -0.82
NEDD1-203ENST00000429527 ANKRD33BA6NCL7 494 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 WEE2P0C1S8 567 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 KRT72Q14CN4 511 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 PSMD6Q15008 389 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 SGO2Q562F6 1265 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 RTP2Q5QGT7 225 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 POLNQ7Z5Q5 900 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 CCDC105Q8IYK2 499 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 TCEAL8Q8IYN2 117 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 CYP4X1Q8N118 509 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 ALLCQ8N6M5 410 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 EDAQ92838 391 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 CBWD1Q9BRT8 395 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 TUBB6Q9BUF5 446 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 PRKD2Q9BZL6 878 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 MYLK2Q9H1R3 596 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 REV3LO60673 3130 aa9.95□□□□□ -0.82
NEDD1-203ENST00000429527 PPP1R12AO14974 1030 aaPredicted RBP9.94□□□□□ -0.82
NEDD1-203ENST00000429527 LIASO43766 372 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 EXTL3O43909 919 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 GLUD1P00367 558 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 CALB2P22676 271 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 PBX3P40426 434 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 LIG4P49917 911 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 CYP2J2P51589 502 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 IL9RQ01113 521 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 SNRNP35Q16560 246 aaKnown RBP9.94□□□□□ -0.82
NEDD1-203ENST00000429527 DBN1Q16643 649 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 USP37Q86T82 979 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 LRRC52Q8N7C0 313 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 KIAA1958Q8N8K9 716 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 LEMD2Q8NC56 503 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 C3orf58Q8NDZ4 430 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 CFAP57Q96MR6 1250 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 PNPLA8Q9NP80 782 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 RAB20Q9NX57 234 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 ANKFY1Q9P2R3 1169 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 DSEQ9UL01 958 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 CHKBQ9Y259 395 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 KIAA1549LQ6ZVL6 1849 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 GREB1Q4ZG55 1949 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms