RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 HALP42357 657 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 SEC23AQ15436 765 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 SPDYCQ5MJ68 293 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 PDPK2PQ6A1A2 396 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 FGD2Q7Z6J4 655 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 DPP10Q8N608 796 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 SOCS4Q8WXH5 440 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 ATG4AQ8WYN0 398 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 ACSF2Q96CM8 615 aaPredicted RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 OLFM1Q99784 485 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 SPATC1LQ9H0A9 340 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 SEMA6BQ9H3T3 888 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 PARVBQ9HBI1 364 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 PAPOLBQ9NRJ5 636 aaKnown RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 RBM22Q9NW64 420 aaKnown RBP eCLIP13.12□□□□□ -0.31
LDB3-205ENST00000429277 PCDHA3Q9Y5H8 950 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 IQSEC2Q5JU85 1478 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 UMODL1Q5DID0 1318 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 SERPINE1P05121 402 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 ACADMP11310 421 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 PABPC1P11940 636 aaKnown RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 IL1R1P14778 569 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 TMED10P49755 219 aaKnown RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 FUT11Q495W5 492 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 FBXO16Q8IX29 292 aaPredicted RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 TDRD5Q8NAT2 981 aaKnown RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 CEP44Q9C0F1 390 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 DLGAP2Q9P1A6 1054 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 PNMA8BQ9ULN7 279 aaPredicted RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 MANSC4A6NHS7 340 aaPredicted RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 CKBP12277 381 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 PTPN4P29074 926 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 TALDO1P37837 337 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 AQP5P55064 265 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 TBX4P57082 545 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 ZCWPW2Q504Y3 356 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 ARMCX4Q5H9R4 360 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 KCNT1Q5JUK3 1230 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 MFSD4BQ5TF39 518 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 TMEM159Q96B96 161 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 CCDC3Q9BQI4 270 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 RAD18Q9NS91 495 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 DDX43Q9NXZ2 648 aaKnown RBP13.12□□□□□ -0.31
LDB3-205ENST00000429277 GPRC5DQ9NZD1 345 aa13.12□□□□□ -0.31
LDB3-205ENST00000429277 UBE2Q2LH0YL09 131 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 PSMD12O00232 456 aaPredicted RBP13.11□□□□□ -0.31
LDB3-205ENST00000429277 PLEKP08567 350 aaPredicted RBP13.11□□□□□ -0.31
LDB3-205ENST00000429277 ERFP50548 548 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 CCT8P50990 548 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 RPS7P62081 194 aaKnown RBP13.11□□□□□ -0.31
LDB3-205ENST00000429277 TBL3Q12788 808 aaKnown RBP13.11□□□□□ -0.31
LDB3-205ENST00000429277 TRIM16LQ309B1 348 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 FAM98BQ52LJ0 330 aaKnown RBP13.11□□□□□ -0.31
LDB3-205ENST00000429277 ATAD3BQ5T9A4 648 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 CYB5D1Q6P9G0 228 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 MCOLN2Q8IZK6 566 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 LRRC39Q96DD0 335 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 DEPDC7Q96QD5 511 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 CPNE1Q99829 537 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 FDXACB1Q9BRP7 624 aaPredicted RBP13.11□□□□□ -0.31
LDB3-205ENST00000429277 INTS13Q9NVM9 706 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 PADI4Q9UM07 663 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 hCG_2014768A0A024R1R8 64 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 CYP2C18P33260 490 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 CASP4P49662 377 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 SCARA3Q6AZY7 606 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 TMEM86AQ8N2M4 240 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 TAS2R13Q9NYV9 303 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 KLHL20Q9Y2M5 609 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 SNX13Q9Y5W8 968 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 V9GYQ6 96 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
LDB3-205ENST00000429277 DDHD2O94830 711 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 VTNP04004 478 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 FYNP06241 537 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 OR56A5P0C7T3 313 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 FGFR2P21802 821 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 STK40Q8N2I9 435 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 WDR48Q8TAF3 677 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 ACTL9Q8TC94 416 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 HIC2Q96JB3 615 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 C1QTNF7Q9BXJ2 289 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 DPY30Q9C005 99 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 KCNQ5Q9NR82 932 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 TMCO1Q9UM00 188 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 CBX4O00257 560 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 AKAP3O75969 853 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 KRT75O95678 551 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 CLTBP09497 229 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 UBTFL6P0CB48 400 aaPredicted RBP13.11□□□□□ -0.31
LDB3-205ENST00000429277 EPHX2P34913 555 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 TUFMP49411 452 aaKnown RBP13.11□□□□□ -0.31
LDB3-205ENST00000429277 FKBP1AP62942 108 aaKnown RBP13.11□□□□□ -0.31
LDB3-205ENST00000429277 YWHAZP63104 245 aaKnown RBP13.11□□□□□ -0.31
LDB3-205ENST00000429277 OVGP1Q12889 678 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 CSHL1Q14406 222 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 PGM5Q15124 567 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 RASA2Q15283 850 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 NR6A1Q15406 480 aa13.11□□□□□ -0.31
LDB3-205ENST00000429277 PGS1Q32NB8 556 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms