RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 SLC22A12Q96S37 553 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 PSMB7Q99436 277 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 NAPGQ99747 312 aaPredicted RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 SMG9Q9H0W8 520 aaKnown RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 TASP1Q9H6P5 420 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 KLHL11Q9NVR0 708 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 CALCOCO1Q9P1Z2 691 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 CD207Q9UJ71 328 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 USP18Q9UMW8 372 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 TLR6Q9Y2C9 796 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 HBS1LQ9Y450 684 aaKnown RBP8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 JRKLQ9Y4A0 524 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 CPQQ9Y646 472 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 TRANK1O15050 2925 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 CUL9Q8IWT3 2517 aa8.23□□□□□ -1.09
HMGA1P4-201ENST00000428643 SCAMP3O14828 347 aaKnown RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 MOSPD3O75425 235 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 PAPLNO95428 1278 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 OLFM2O95897 454 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 ATP1A1P05023 1023 aaKnown RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 PFKLP17858 780 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 IL1R2P27930 398 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 CASQ1P31415 396 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 CTNNA1P35221 906 aaKnown RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 LTBRP36941 435 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 MTHFRP42898 656 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 CXCR3P49682 368 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 SLC25A11Q02978 314 aaKnown RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 RING1Q06587 406 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 KRT81Q14533 505 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 ARL13BQ3SXY8 428 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 KCNT1Q5JUK3 1230 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 BRMS1LQ5PSV4 323 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 MEI1Q5TIA1 1274 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 LRRC38Q5VT99 294 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 NUGGCQ68CJ6 796 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 TXNRD3NBQ6F5E7 133 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 POLNQ7Z5Q5 900 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 NPAS3Q8IXF0 933 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 CMTM8Q8IZV2 173 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZNF276Q8N554 614 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 CCDC185Q8N715 623 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 SMRP1Q8NCR6 262 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZSCAN18Q8TBC5 510 aaPredicted RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 KRT35Q92764 455 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 PLD4Q96BZ4 506 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 PGAP3Q96FM1 320 aaPredicted RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 MSLNLQ96KJ4 702 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 FCRL2Q96LA5 508 aaPredicted RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 PEBP4Q96S96 227 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 CYP2S1Q96SQ9 504 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 SNRNP25Q9BV90 132 aaKnown RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 SLC46A2Q9BY10 475 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 RNF38Q9H0F5 515 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 TKTL2Q9H0I9 626 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 WDCPQ9H6R7 721 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 UBE2ZQ9H832 354 aaPredicted RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 WDR6Q9NNW5 1121 aaKnown RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 GPATCH2LQ9NWQ4 482 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 MTMR10Q9NXD2 777 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 CFAP97Q9P2B7 532 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 ZMYM5Q9UJ78 669 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 LSM7Q9UK45 103 aaKnown RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 AP4E1Q9UPM8 1137 aa8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 USP15Q9Y4E8 981 aaPredicted RBP8.22□□□□□ -1.09
HMGA1P4-201ENST00000428643 LRRD1A4D1F6 860 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 KCNK3O14649 394 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZNF500O60304 480 aaPredicted RBP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 ENDOD1O94919 500 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 PRAMEF12O95522 483 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 IGLV3-27P01718 113 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 RARAP10276 462 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 CTNNA2P26232 953 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 CORO1AP31146 461 aaKnown RBP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 GBP2P32456 591 aaPredicted RBP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 GGCXP38435 758 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 HARS2P49590 506 aaKnown RBP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 KCNQ1P51787 676 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 SLC7A9P82251 487 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 COG7P83436 770 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 SCAPQ12770 1279 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 PPP2R5DQ14738 602 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 CBX2Q14781 532 aaPredicted RBP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 BOLA3Q53S33 107 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 PPP6R3Q5H9R7 873 aaPredicted RBP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 DNTTIP2Q5QJE6 756 aaKnown RBP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 BNIPLQ7Z465 357 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 CHSY1Q86X52 802 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 DDX42Q86XP3 938 aaKnown RBP eCLIP8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 CCDC50Q8IVM0 306 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 KATNAL2Q8IYT4 538 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 ATP6V0D2Q8N8Y2 350 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 KCTD6Q8NC69 237 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 SH3RF2Q8TEC5 729 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 TEKT4Q8WW24 435 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 ALG3Q92685 438 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 FGF13Q92913 245 aa8.21□□□□□ -1.1
HMGA1P4-201ENST00000428643 USP13Q92995 863 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms