RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 ITPR3Q14573 2671 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 TBX18O95935 607 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 PIGRP01833 764 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 CENPBP07199 599 aaPredicted RBP9.69□□□□□ -0.86
LSG1-202ENST00000427461 FDPSP14324 419 aaKnown RBP9.69□□□□□ -0.86
LSG1-202ENST00000427461 GUCY2CP25092 1073 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 YWHAQP27348 245 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 RBMS1P29558 406 aaKnown RBP9.69□□□□□ -0.86
LSG1-202ENST00000427461 DAB2P98082 770 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 TFAMQ00059 246 aaKnown RBP9.69□□□□□ -0.86
LSG1-202ENST00000427461 MDH1BQ5I0G3 518 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 TMEM215Q68D42 235 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 XKR5Q6UX68 686 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 CRELD2Q6UXH1 353 aaPredicted RBP9.69□□□□□ -0.86
LSG1-202ENST00000427461 SERPINA13PQ6UXR4 307 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 RUFY3Q7L099 469 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 HS2ST1Q7LGA3 356 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 TMC6Q7Z403 805 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 SPATS2Q86XZ4 545 aaKnown RBP9.69□□□□□ -0.86
LSG1-202ENST00000427461 RBBP8NLQ8NC74 664 aaPredicted RBP9.69□□□□□ -0.86
LSG1-202ENST00000427461 SCAMP5Q8TAC9 235 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 CXorf38Q8TB03 319 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 KBTBD7Q8WVZ9 684 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 CCDC97Q96F63 343 aaPredicted RBP9.69□□□□□ -0.86
LSG1-202ENST00000427461 C8orf48Q96LL4 319 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 CEP295NLQ96MC4 621 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 SLC25A18Q9H1K4 315 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 IKZF4Q9H2S9 585 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 GDAP2Q9NXN4 497 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 CDH9Q9ULB4 789 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 CLEC4EQ9ULY5 219 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 NME7Q9Y5B8 376 aa9.69□□□□□ -0.86
LSG1-202ENST00000427461 A0A1B0GVM2 712 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 CDRT15L2A8MXV6 281 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 CLDN5O00501 218 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 NPC1O15118 1278 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 YKT6O15498 198 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 PPFIA2O75334 1257 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 CDKL5O76039 1030 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 AFMP43652 599 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 RXRGP48443 463 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 NXPH1P58417 271 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 RPS14P62263 151 aaKnown RBP9.68□□□□□ -0.86
LSG1-202ENST00000427461 CAMK2GQ13555 558 aaPredicted RBP9.68□□□□□ -0.86
LSG1-202ENST00000427461 KCNJ12Q14500 433 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 CLCA4Q14CN2 919 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 TGIF1Q15583 401 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 TBR1Q16650 682 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 ADALQ6DHV7 355 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 NUP93Q8N1F7 819 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 TOP6BLQ8N6T0 577 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 UCMAQ8WVF2 138 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 SKA1Q96BD8 255 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 SGF29Q96ES7 293 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 ATXN7L3BQ96GX2 97 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 PHF12Q96QT6 1004 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 KLF16Q9BXK1 252 aaPredicted RBP9.68□□□□□ -0.86
LSG1-202ENST00000427461 CIPCQ9C0C6 399 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 ZNF518BQ9C0D4 1074 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 NACA2Q9H009 215 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 ELOVL2Q9NXB9 296 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.68□□□□□ -0.86
LSG1-202ENST00000427461 SLC27A6Q9Y2P4 619 aa9.68□□□□□ -0.86
LSG1-202ENST00000427461 TLR4O00206 839 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 CYP26A1O43174 497 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 ITGB2P05107 769 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 KRT19P08727 400 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 SFTPCP11686 197 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 PSMA5P28066 241 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 GALCP54803 685 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 CYP4F2P78329 520 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 ISXQ2M1V0 245 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 SNX30Q5VWJ9 437 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 NCEH1Q6PIU2 408 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 IGF2-ASQ6U949 168 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 SKAP1Q86WV1 359 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 SLC25A45Q8N413 288 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 CSGALNACT2Q8N6G5 542 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 NSUN7Q8NE18 718 aaKnown RBP9.67□□□□□ -0.86
LSG1-202ENST00000427461 ZSWIM2Q8NEG5 633 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 PDZD8Q8NEN9 1154 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 MYCBPAPQ8TBZ2 947 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 PIWIL1Q96J94 861 aaKnown RBP9.67□□□□□ -0.86
LSG1-202ENST00000427461 KCNK16Q96T55 309 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 PLIN2Q99541 437 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 TIPINQ9BVW5 301 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 MFRPQ9BY79 579 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 SGK2Q9HBY8 427 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.67□□□□□ -0.86
LSG1-202ENST00000427461 SERGEFQ9UGK8 458 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 SIX4Q9UIU6 781 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 KCNG1Q9UIX4 513 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 AGO2Q9UKV8 859 aaKnown RBP9.67□□□□□ -0.86
LSG1-202ENST00000427461 ATXN7L1Q9ULK2 861 aaPredicted RBP9.67□□□□□ -0.86
LSG1-202ENST00000427461 PLAAQ9Y263 795 aa9.67□□□□□ -0.86
LSG1-202ENST00000427461 TDRD6O60522 2096 aaKnown RBP9.67□□□□□ -0.86
LSG1-202ENST00000427461 CRYBG3Q68DQ2 2970 aa9.66□□□□□ -0.86
LSG1-202ENST00000427461 CELSR2Q9HCU4 2923 aa9.66□□□□□ -0.86
LSG1-202ENST00000427461 K7ENM7 598 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms