RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 SLC12A8A0AV02 714 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 KHNYNO15037 678 aaKnown RBP20.95■□□□□ 0.94
CCDC107-206ENST00000426546 ZBTB24O43167 697 aaPredicted RBP20.95■□□□□ 0.94
CCDC107-206ENST00000426546 CYBBP04839 570 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 DPP6P42658 865 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 WASP42768 502 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 STILQ15468 1287 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 DAB2IPQ5VWQ8 1189 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 FAM217AQ8IXS0 508 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 SIX6OS1Q8N1H7 587 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 PPM1KQ8N3J5 372 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 FRMD1Q8N878 549 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 LMO3Q8TAP4 145 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 IPO4Q8TEX9 1081 aaKnown RBP20.95■□□□□ 0.94
CCDC107-206ENST00000426546 CNGB3Q9NQW8 809 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 CALCOCO1Q9P1Z2 691 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 WASF3Q9UPY6 502 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 CTNND2Q9UQB3 1225 aa20.95■□□□□ 0.94
CCDC107-206ENST00000426546 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 C1QTNF9BB2RNN3 333 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 GNA14O95837 355 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 C1QTNF9P0C862 333 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 PI4KAP42356 2102 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 MFAP3P55082 362 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 MARSP56192 900 aaKnown RBP20.94■□□□□ 0.94
CCDC107-206ENST00000426546 GCNT1Q02742 428 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 ZNF252P-AS1Q0IIN9 211 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 TRIP4Q15650 581 aaPredicted RBP20.94■□□□□ 0.94
CCDC107-206ENST00000426546 SH3PXD2AQ5TCZ1 1133 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 SLC36A4Q6YBV0 504 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 TRIM59Q8IWR1 403 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 TMEFF1Q8IYR6 380 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 UBA3Q8TBC4 463 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 RNF139Q8WU17 664 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 TFAP2BQ92481 460 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 PIGKQ92643 395 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 ABCC13Q9NSE7 274 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 EVLQ9UI08 416 aaPredicted RBP20.94■□□□□ 0.94
CCDC107-206ENST00000426546 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.94■□□□□ 0.94
CCDC107-206ENST00000426546 HBS1LQ9Y450 684 aaKnown RBP20.94■□□□□ 0.94
CCDC107-206ENST00000426546 PCDHB4Q9Y5E5 795 aa20.94■□□□□ 0.94
CCDC107-206ENST00000426546 YJEFN3A6XGL0 299 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 PATE3B3GLJ2 98 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 E7ENQ6 273 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 BIN1O00499 593 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 CDX4O14627 284 aaPredicted RBP20.93■□□□□ 0.94
CCDC107-206ENST00000426546 NPC1O15118 1278 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 AP5Z1O43299 807 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 ZNF217O75362 1048 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 NDUFV2P19404 249 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 HOXD12P35452 270 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 PTGER3P43115 390 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 PAK1Q13153 545 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 CNGA2Q16280 664 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 BSPRYQ5W0U4 402 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 KIAA1211LQ6NV74 962 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 UNQ6494/PRO21346Q6UXR6 183 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 SYT12Q8IV01 421 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 FMNL3Q8IVF7 1028 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 SLC35F5Q8WV83 523 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 NDRG1Q92597 394 aaKnown RBP20.93■□□□□ 0.94
CCDC107-206ENST00000426546 SLC2A11Q9BYW1 496 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 TMEM9BQ9NQ34 198 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 CACNA2D2Q9NY47 1150 aa20.93■□□□□ 0.94
CCDC107-206ENST00000426546 GADD45BO75293 160 aaPredicted RBP20.92■□□□□ 0.94
CCDC107-206ENST00000426546 LATS1O95835 1130 aa20.92■□□□□ 0.94
CCDC107-206ENST00000426546 HARS2P49590 506 aaKnown RBP20.92■□□□□ 0.94
CCDC107-206ENST00000426546 ZNF132P52740 706 aa20.92■□□□□ 0.94
CCDC107-206ENST00000426546 DAOAP59103 153 aa20.92■□□□□ 0.94
CCDC107-206ENST00000426546 ZNF445P59923 1031 aa20.92■□□□□ 0.94
CCDC107-206ENST00000426546 KCNH2Q12809 1159 aa20.92■□□□□ 0.94
CCDC107-206ENST00000426546 FOXC1Q12948 553 aa20.92■□□□□ 0.94
CCDC107-206ENST00000426546 EIF4HQ15056 248 aaKnown RBP20.92■□□□□ 0.94
CCDC107-206ENST00000426546 E2F5Q15329 346 aa20.92■□□□□ 0.94
CCDC107-206ENST00000426546 PEAR1Q5VY43 1037 aaPredicted RBP20.92■□□□□ 0.94
CCDC107-206ENST00000426546 LYSMD4Q5XG99 296 aa20.92■□□□□ 0.94
CCDC107-206ENST00000426546 IRGQQ8WZA9 623 aa20.92■□□□□ 0.94
CCDC107-206ENST00000426546 KAT5Q92993 513 aa20.92■□□□□ 0.94
CCDC107-206ENST00000426546 PIWIL1Q96J94 861 aaKnown RBP20.92■□□□□ 0.94
CCDC107-206ENST00000426546 GON4LQ3T8J9 2241 aa20.92■□□□□ 0.94
CCDC107-206ENST00000426546 IGHV1OR15-9A0A0B4J2B8 117 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 RNF225M0QZC1 329 aaPredicted RBP20.91■□□□□ 0.94
CCDC107-206ENST00000426546 SPINK2P20155 84 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 CSRP1P21291 193 aaKnown RBP20.91■□□□□ 0.94
CCDC107-206ENST00000426546 IRX4P78413 519 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 RPL6Q02878 288 aaKnown RBP20.91■□□□□ 0.94
CCDC107-206ENST00000426546 ENPP2Q13822 863 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 CKAP5Q14008 2032 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 GEN1Q17RS7 908 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 PMF1Q6P1K2 205 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 MSANTD2Q6P1R3 559 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 ARMCX6Q7L4S7 300 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 ANKS1BQ7Z6G8 1248 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 TRIML1Q8N9V2 468 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 RBBP8NLQ8NC74 664 aaPredicted RBP20.91■□□□□ 0.94
CCDC107-206ENST00000426546 EHBP1Q8NDI1 1231 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 DDI1Q8WTU0 396 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 UCMAQ8WVF2 138 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 EDEM1Q92611 657 aa20.91■□□□□ 0.94
CCDC107-206ENST00000426546 ZSWIM1Q9BR11 485 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms