RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 BACH2Q9BYV9 841 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 BTBD1Q9H0C5 482 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SDCBP2Q9H190 292 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 DMAC2Q9NW81 257 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 MARCH2Q9P0N8 246 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 HESX1Q9UBX0 185 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 EIF2B4Q9UI10 523 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 NUDT5Q9UKK9 219 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ANK1P16157 1881 aa12.86□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TYW5A2RUC4 315 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 E9PAM4 449 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CILPO75339 1184 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 GJB3O75712 270 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 PENKP01210 267 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 PSMC2P35998 433 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 C21orf59P57076 290 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ST8SIA6P61647 398 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 YWHAGP61981 247 aaKnown RBP eCLIP12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 YWHAEP62258 255 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ENPEPQ07075 957 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 EHHADHQ08426 723 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 PDE4CQ08493 712 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ZNF234Q14588 700 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 FNDC3BQ53EP0 1204 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 Q6ZNB5 142 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 PDZD3Q86UT5 571 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 FAM124AQ86V42 546 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 GANCQ8TET4 914 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 PLD4Q96BZ4 506 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 IPO9Q96P70 1041 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 NIF3L1Q9GZT8 377 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SLC6A17Q9H1V8 727 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 LHX5Q9H2C1 402 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 NMUR1Q9HB89 426 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 LRRC4Q9HBW1 653 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 AGO1Q9UL18 857 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SCML1Q9UN30 329 aa12.85□□□□□ -0.35
HLA-DQB3-203ENST00000425319 GOLGA8CPA6NN73 597 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TAF4O00268 1085 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 MDM4O15151 490 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TNFSF14O43557 240 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 GREM1O60565 184 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 POLR2EP19388 210 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 GTF2H1P32780 548 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 IL12RB1P42701 662 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 GRK6P43250 576 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ASPAP45381 313 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 BCAT1P54687 386 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 DLG4P78352 724 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 INCA1Q0VD86 236 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 GEN1Q17RS7 908 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TMPRSS7Q7RTY8 843 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 HNRNPLLQ8WVV9 542 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 TMEM176AQ96HP8 235 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 DDX50Q9BQ39 737 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 MKRN2Q9H000 416 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 MMRN2Q9H8L6 949 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SGK2Q9HBY8 427 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 OSGEPQ9NPF4 335 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 SERTAD1Q9UHV2 236 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 HCN2Q9UL51 889 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 PCDHA7Q9UN72 937 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 GPSM3Q9Y4H4 160 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 USP3Q9Y6I4 520 aa12.84□□□□□ -0.35
HLA-DQB3-203ENST00000425319 IGLV3-19P01714 112 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 NR2F2P24468 414 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CASP1P29466 404 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CSNK1EP49674 416 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 STK4Q13043 487 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ADAM9Q13443 819 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ENPP2Q13822 863 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 COL28A1Q2UY09 1125 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SLC45A4Q5BKX6 768 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PPP1R26Q5T8A7 1209 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FYB2Q5VWT5 728 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 RESP18Q5W5W9 173 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 KRT39Q6A163 491 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SPOPLQ6IQ16 392 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 LRRC69Q6ZNQ3 347 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 UNC45BQ8IWX7 931 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 FAM186BQ8IYM0 893 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 AHI1Q8N157 1196 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 PLEKHO2Q8TD55 490 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 ACE2Q9BYF1 805 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 IRX2Q9BZI1 471 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TMEM8AQ9HCN3 771 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CD248Q9HCU0 757 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 SCUBE2Q9NQ36 999 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 OSER1Q9NX31 292 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TPX2Q9ULW0 747 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 TRAF3IP3Q9Y228 551 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 HBS1LQ9Y450 684 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 CHD8Q9HCK8 2581 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 EML5Q05BV3 1969 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 NUP205Q92621 2012 aa12.83□□□□□ -0.36
HLA-DQB3-203ENST00000425319 A0A1B0GVT2 93 aa12.82□□□□□ -0.36
HLA-DQB3-203ENST00000425319 HHLA1C9JL84 531 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms