RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 RFC1P35251 1148 aaPredicted RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 PGGT1BP53609 377 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 CRADDP78560 199 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 WDR75Q8IWA0 830 aaKnown RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 TNS4Q8IZW8 715 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 PIWIL2Q8TC59 973 aaKnown RBP11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 VPS50Q96JG6 964 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 C7orf26Q96N11 449 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 BTBD9Q96Q07 612 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 ARPC5LQ9BPX5 153 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 EPS15L1Q9UBC2 864 aa11.65□□□□□ -0.54
SEC61A1-202ENST00000424880 MATN2O00339 956 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 PSTPIP1O43586 416 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 PSMC3P17980 439 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 EIF2AK2P19525 551 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 WNT7BP56706 349 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 GNA12Q03113 381 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC18A2Q05940 514 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 DMPKQ09013 629 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 PPM1JQ5JR12 505 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 FGD3Q5JSP0 725 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 RARS2Q5T160 578 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 EMC1Q8N766 993 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 THAP11Q96EK4 314 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 FAM213AQ9BRX8 229 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 CALN1Q9BXU9 219 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 WDR55Q9H6Y2 383 aaPredicted RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 hCG_1818297A0A087WSY0 165 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 ATE1O95260 518 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 ZBED1O96006 694 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 ATP2B4P23634 1241 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC1A6P48664 564 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 NT5C2P49902 561 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 IDH3AP50213 366 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 PPP4CP60510 307 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 CREB5Q02930 508 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC10A2Q12908 348 aaPredicted RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 MMRN1Q13201 1228 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 TFDP3Q5H9I0 405 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 FAM102BQ5T8I3 360 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 FAM219BQ5XKK7 198 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 SLFN13Q68D06 897 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 PLA2G4FQ68DD2 849 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 ERI1Q8IV48 349 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 ADGRF2Q8IZF7 708 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 CENPSQ8N2Z9 138 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 FAM110BQ8TC76 370 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 NLRP7Q8WX94 980 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 CRYGNQ8WXF5 182 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 NEURL2Q9BR09 285 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 GPATCH1Q9BRR8 931 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 TMEM79Q9BSE2 394 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 EIF2AQ9BY44 585 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 OSBPL6Q9BZF3 934 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 C1orf21Q9H246 121 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 Q9H521 79 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 PCDH9Q9HC56 1237 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 ARHGAP26Q9UNA1 814 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 FAM32AQ9Y421 112 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 BPTFQ12830 3046 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 DDX60LQ5H9U9 1706 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 PSMD12O00232 456 aaPredicted RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 LDHCP07864 332 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 NR4A1P22736 598 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 GSTO1P78417 241 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 USP41Q3LFD5 358 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 THOC7Q6I9Y2 204 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 KRT80Q6KB66 452 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 SNX31Q8N9S9 440 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 ATP6V1E2Q96A05 226 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 C12orf43Q96C57 262 aaKnown RBP11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 FAM20AQ96MK3 541 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 KLHL32Q96NJ5 620 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 CIB1Q99828 191 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 SERPINB13Q9UIV8 391 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 PSMD13Q9UNM6 376 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 PCDHB4Q9Y5E5 795 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 PCDHAC2Q9Y5I4 1007 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 CORINQ9Y5Q5 1042 aa11.64□□□□□ -0.55
SEC61A1-202ENST00000424880 ANKRD31Q8N7Z5 1873 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 RIMBP2O15034 1052 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 RNASEH2AO75792 299 aaKnown RBP11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 APRTP07741 180 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 GNAO1P09471 354 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 TNNI1P19237 187 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 GNA15P30679 374 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 SOX11P35716 441 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 ABCG1P45844 678 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 PHKA2P46019 1235 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 CCR10P46092 362 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 STAT2P52630 851 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 PSMC1P62191 440 aaKnown RBP11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 NFIAQ12857 509 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 APOFQ13790 326 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 RCOR2Q8IZ40 523 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 MPP5Q8N3R9 675 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 NAT16Q8N8M0 369 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 FEZF2Q8TBJ5 459 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 TMA16Q96EY4 203 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms