RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 DEFB124Q8NES8 71 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 ZNF419Q96HQ0 510 aaPredicted RBP13.61□□□□□ -0.23
VRK3-203ENST00000424804 FAXDC2Q96IV6 333 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 PIWIL1Q96J94 861 aaKnown RBP13.61□□□□□ -0.23
VRK3-203ENST00000424804 SPACA7Q96KW9 195 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 MRGPRX1Q96LB2 322 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 XPO6Q96QU8 1125 aaKnown RBP13.61□□□□□ -0.23
VRK3-203ENST00000424804 DNAI2Q9GZS0 605 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 NACA2Q9H009 215 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 CISHQ9NSE2 258 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 CACNA2D2Q9NY47 1150 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 RWDD2AQ9UIY3 292 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 SLC27A6Q9Y2P4 619 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.61□□□□□ -0.23
VRK3-203ENST00000424804 KNL1Q8NG31 2342 aa13.61□□□□□ -0.23
VRK3-203ENST00000424804 UPK3BL1B0FP48 263 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 C1QTNF9BB2RNN3 333 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 UPK3BL2E5RIL1 263 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 GFRA2O00451 464 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 GABBR2O75899 941 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 GNA14O95837 355 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 PROS1P07225 676 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 C1QTNF9P0C862 333 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 HOXD12P35452 270 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 DGKGP49619 791 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 MFAP3P55082 362 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 ZNF33AQ06730 810 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 CETN1Q12798 172 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 KCNH2Q12809 1159 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 GEN1Q17RS7 908 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 DPCR1Q3MIW9 517 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 HSP90AA4PQ58FG1 418 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 TMEM215Q68D42 235 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 ARHGAP17Q68EM7 881 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 PM20D1Q6GTS8 502 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 PIGZQ86VD9 579 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 FAM217AQ8IXS0 508 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 CHPFQ8IZ52 775 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 UBR7Q8N806 425 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 MLKLQ8NB16 471 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 NDRG1Q92597 394 aaKnown RBP13.6□□□□□ -0.23
VRK3-203ENST00000424804 BHMTQ93088 406 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 TMEM176AQ96HP8 235 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 HEXIM2Q96MH2 286 aaKnown RBP13.6□□□□□ -0.23
VRK3-203ENST00000424804 NAGPAQ9UK23 515 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 LSM7Q9UK45 103 aaKnown RBP13.6□□□□□ -0.23
VRK3-203ENST00000424804 AGO1Q9UL18 857 aaKnown RBP13.6□□□□□ -0.23
VRK3-203ENST00000424804 SLC6A14Q9UN76 642 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 COQ4Q9Y3A0 265 aa13.6□□□□□ -0.23
VRK3-203ENST00000424804 DMXL2Q8TDJ6 3036 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 GJB3O75712 270 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 SERPINF2P08697 491 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 MTIF2P46199 727 aaKnown RBP13.59□□□□□ -0.23
VRK3-203ENST00000424804 PSEN1P49768 467 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 FAM193AP78312 1265 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 RPL6Q02878 288 aaKnown RBP13.59□□□□□ -0.23
VRK3-203ENST00000424804 LMAN2Q12907 356 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 CUL2Q13617 745 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 NUMA1Q14980 2115 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 DUOXA1Q1HG43 343 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 UAP1L1Q3KQV9 507 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 SLC36A4Q6YBV0 504 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 METTL3Q86U44 580 aaKnown RBP13.59□□□□□ -0.23
VRK3-203ENST00000424804 ANKRD52Q8NB46 1076 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 OR2I1PQ8NGU4 316 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 GATA6Q92908 595 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 NUSAP1Q9BXS6 441 aaKnown RBP13.59□□□□□ -0.23
VRK3-203ENST00000424804 THAP10Q9P2Z0 257 aaPredicted RBP13.59□□□□□ -0.23
VRK3-203ENST00000424804 DACH1Q9UI36 760 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 CYP8B1Q9UNU6 501 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 STON1Q9Y6Q2 735 aa13.59□□□□□ -0.23
VRK3-203ENST00000424804 LAMA5O15230 3695 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 KCNJ18B7U540 433 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 AP5Z1O43299 807 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 AFPP02771 609 aaKnown RBP13.58□□□□□ -0.24
VRK3-203ENST00000424804 HMBSP08397 361 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 C7P10643 843 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 CD59P13987 128 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 CORO1AP31146 461 aaKnown RBP13.58□□□□□ -0.24
VRK3-203ENST00000424804 IL12RB1P42701 662 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 MAPK8P45983 427 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 EFEMP1Q12805 493 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 FOXC1Q12948 553 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 FUT11Q495W5 492 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 PKDCCQ504Y2 493 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 NUDT18Q6ZVK8 323 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 TRIM59Q8IWR1 403 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 PPM1KQ8N3J5 372 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 KDF1Q8NAX2 398 aaPredicted RBP13.58□□□□□ -0.24
VRK3-203ENST00000424804 NT5C1BQ96P26 610 aa13.58□□□□□ -0.24
VRK3-203ENST00000424804 MKRN2Q9H000 416 aaKnown RBP13.58□□□□□ -0.24
VRK3-203ENST00000424804 USP36Q9P275 1121 aaKnown RBP13.58□□□□□ -0.24
VRK3-203ENST00000424804 PES1O00541 588 aaKnown RBP13.57□□□□□ -0.24
VRK3-203ENST00000424804 ZNF217O75362 1048 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 RALAP11233 206 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 CD19P15391 556 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 DPP6P42658 865 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 COPAP53621 1224 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 YWHAEP62258 255 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms