RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 FAM89AQ96GI7 184 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ZNF764Q96H86 408 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 AK8Q96MA6 479 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 FAM210AQ96ND0 272 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 GDF15Q99988 308 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 REEP2Q9BRK0 252 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 RTKNQ9BST9 563 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 CRACR2AQ9BSW2 395 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 TCHPQ9BT92 498 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 MRIQ9BWK5 157 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 MAK16Q9BXY0 300 aaKnown RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 FUT8Q9BYC5 575 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PCED1AQ9H1Q7 454 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PABPC3Q9H361 631 aaKnown RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ABHD16BQ9H3Z7 469 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 TAF1DQ9H5J8 278 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 TASP1Q9H6P5 420 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 LIN28AQ9H9Z2 209 aaKnown RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 MID1IP1Q9NPA3 183 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PFDN4Q9NQP4 134 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PRDM8Q9NQV8 689 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 SNTG1Q9NSN8 517 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 SACM1LQ9NTJ5 587 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PNPOQ9NVS9 261 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PLA2G3Q9NZ20 509 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 RGL1Q9NZL6 768 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 CALCOCO1Q9P1Z2 691 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 C2CD2Q9Y426 696 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 HS3ST3A1Q9Y663 406 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 SQORQ9Y6N5 450 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 FAM171A2A8MVW0 826 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 H0YAE9 185 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 UBXN8O00124 270 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 AP3B1O00203 1094 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 CACNB4O00305 520 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 SUV39H1O43463 412 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 COQ9O75208 318 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 GGPS1O95749 300 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 ANXA1P04083 346 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 SNRPA1P09661 255 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 TYRP14679 529 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 FERP16591 822 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 NPPBP16860 134 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 BTF3P20290 206 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 TMOD1P28289 359 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 TM4SF1P30408 202 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 ADSLP30566 484 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 TLX1P31314 330 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 HSPA1LP34931 641 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 SULT1E1P49888 294 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 STAT5BP51692 787 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 PPP5CP53041 499 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 RRP1P56182 461 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 LGALS4P56470 323 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 RPS16P62249 146 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 ACTN3Q08043 901 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 CBX3Q13185 183 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 IL10RAQ13651 578 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 KBTBD12Q3ZCT8 623 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 SLC44A4Q53GD3 710 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 HSP90AA5PQ58FG0 334 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 DCAF17Q5H9S7 520 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 DNTTIP2Q5QJE6 756 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 FAXCQ5TGI0 409 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 GARNL3Q5VVW2 1013 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 MFSD5Q6N075 450 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 TAF2Q6P1X5 1199 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 SLC2A7Q6PXP3 512 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 USP17L6PQ6QN14 398 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 MAMDC4Q6UXC1 1216 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 Q6ZSN1 163 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 RNF44Q7L0R7 432 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 LRRC8DQ7L1W4 858 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 CHST3Q7LGC8 479 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 HEATR3Q7Z4Q2 680 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 HDDC3Q8N4P3 179 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 ZNF808Q8N4W9 903 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 OR14K1Q8NGZ2 314 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 BRIX1Q8TDN6 353 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 FAM216AQ8WUB2 273 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 KBTBD7Q8WVZ9 684 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 VPS33AQ96AX1 596 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 FOXRED1Q96CU9 486 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 KTI12Q96EK9 354 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 CLMNQ96JQ2 1002 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 CNDP1Q96KN2 507 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 SNX27Q96L92 541 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 C16orf92Q96LL3 132 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 NOL10Q9BSC4 688 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 ADI1Q9BV57 179 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 MMADHCQ9H3L0 296 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 SIRT3Q9NTG7 399 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 DECR2Q9NUI1 292 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 HCFC1R1Q9NWW0 138 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 TAS2R3Q9NYW6 316 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 COQ3Q9NZJ6 369 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 CWC15Q9P013 229 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 MRPL15Q9P015 296 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 ACTR3BQ9P1U1 418 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms