RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 VEGFCP49767 419 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 SUMO2P61956 95 aaKnown RBP1.54□□□□□ -2.16
PMS1-210ENST00000424307 IGBP1P78318 339 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 CFHR3Q02985 330 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 MTX1Q13505 466 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 RNF220Q5VTB9 566 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 RAP1GAP2Q684P5 730 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 TCEAL8Q8IYN2 117 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 EME1Q96AY2 570 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 LRRC46Q96FV0 321 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 TRMT61AQ96FX7 289 aaKnown RBP1.54□□□□□ -2.16
PMS1-210ENST00000424307 APIPQ96GX9 242 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 CCDC17Q96LX7 622 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 HS6ST2Q96MM7 605 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 FSCN3Q9NQT6 498 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 MSRB1Q9NZV6 116 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 SEMA5BQ9P283 1151 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 KLHL42Q9P2K6 505 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 COG5Q9UP83 839 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 USP22Q9UPT9 525 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 C2CD4BA6NLJ0 364 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 A6NNC1 897 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 NDST3O95803 873 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 CTSAP10619 480 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 SLC5A1P13866 664 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 RHCEP18577 417 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 IBSPP21815 317 aaPredicted RBP1.54□□□□□ -2.16
PMS1-210ENST00000424307 MST1P26927 711 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 EPHA3P29320 983 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 PRKAR1BP31321 381 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 ATICP31939 592 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 WDR5P61964 334 aaKnown RBP1.54□□□□□ -2.16
PMS1-210ENST00000424307 EGR4Q05215 589 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 SEMA5AQ13591 1074 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 SLC29A2Q14542 456 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 NXNQ6DKJ4 435 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 ABLIM2Q6H8Q1 611 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 CRTC1Q6UUV9 634 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 CHST15Q7LFX5 561 aaPredicted RBP1.54□□□□□ -2.16
PMS1-210ENST00000424307 MMP21Q8N119 569 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 C12orf76Q8N812 135 aaPredicted RBP1.54□□□□□ -2.16
PMS1-210ENST00000424307 RNF152Q8N8N0 203 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 SNX22Q96L94 193 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 HIST1H2AAQ96QV6 131 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 WDR24Q96S15 920 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 NTPCRQ9BSD7 190 aaKnown RBP1.54□□□□□ -2.16
PMS1-210ENST00000424307 TMEM8AQ9HCN3 771 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 FZD4Q9ULV1 537 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 PCDHAC2Q9Y5I4 1007 aa1.54□□□□□ -2.16
PMS1-210ENST00000424307 ZNF814B7Z6K7 855 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 PSMD9O00233 223 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 CCP110O43303 1012 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 FRS3O43559 492 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 TMPRSS11DO60235 418 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 KAT7O95251 611 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 PLAUP00749 431 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 TSHRP16473 764 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 TPH1P17752 444 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 VCAM1P19320 739 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 RBL1P28749 1068 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 PRIM2P49643 509 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 EIF4A1P60842 406 aaKnown RBP1.53□□□□□ -2.16
PMS1-210ENST00000424307 DNASE1L3Q13609 305 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 PGM5Q15124 567 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 MINDY4Q4G0A6 757 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 CC2D1BQ5T0F9 858 aaKnown RBP1.53□□□□□ -2.16
PMS1-210ENST00000424307 CXorf57Q6NSI4 855 aaKnown RBP1.53□□□□□ -2.16
PMS1-210ENST00000424307 ZNF549Q6P9A3 640 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 C16orf89Q6UX73 402 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 COLCA1Q6ZS62 124 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 PIK3AP1Q6ZUJ8 805 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 PNPLA1Q8N8W4 532 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 B4GALNT2Q8NHY0 566 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 TTC8Q8TAM2 541 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 SUN3Q8TAQ9 357 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 SLC25A32Q9H2D1 315 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 OBP2AQ9NY56 170 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 FNIP2Q9P278 1114 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 DNAJB11Q9UBS4 358 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 OGDHLQ9ULD0 1010 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 FRMPD2Q68DX3 1309 aaPredicted RBP1.53□□□□□ -2.16
PMS1-210ENST00000424307 COL15A1P39059 1388 aa1.53□□□□□ -2.16
PMS1-210ENST00000424307 KIF26BQ2KJY2 2108 aa1.53□□□□□ -2.17
PMS1-210ENST00000424307 WDR81Q562E7 1941 aa1.53□□□□□ -2.17
PMS1-210ENST00000424307 TMEM272A0A1B0GTI8 110 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 E2F8A0AVK6 867 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 ISM1B1AKI9 464 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 M0QYT0 321 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 ATG13O75143 517 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 IL18RAPO95256 599 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 ZBED1O96006 694 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 NGFRP08138 427 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 TMIGD3P0DMS9 266 aaPredicted RBP1.52□□□□□ -2.17
PMS1-210ENST00000424307 HOXB2P14652 356 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 PECAM1P16284 738 aaPredicted RBP1.52□□□□□ -2.17
PMS1-210ENST00000424307 DRD1P21728 446 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 NDUFS1P28331 727 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 NOVP48745 357 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 MTHFSP49914 203 aa1.52□□□□□ -2.17
PMS1-210ENST00000424307 POU3F1Q03052 451 aaPredicted RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms