RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 THEGQ9P2T0 379 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 ARHGAP26Q9UNA1 814 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 TLR6Q9Y2C9 796 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 HYOU1Q9Y4L1 999 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 CAPN6Q9Y6Q1 641 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 TCF20Q9UGU0 1960 aaKnown RBP16.35■□□□□ 0.21
DDX55-203ENST00000421670 LRCH4O75427 683 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 PROSCO94903 275 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 LAMP2P13473 410 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 TCF4P15884 667 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 FCARP24071 287 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 GBP1P32455 592 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 DEKP35659 375 aaKnown RBP16.34■□□□□ 0.21
DDX55-203ENST00000421670 VIPR2P41587 438 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 PIGHQ14442 188 aaPredicted RBP16.34■□□□□ 0.21
DDX55-203ENST00000421670 HS1BP3Q53T59 392 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 ZC3H12AQ5D1E8 599 aaKnown RBP16.34■□□□□ 0.21
DDX55-203ENST00000421670 ZNF662Q6ZS27 426 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 STRADAQ7RTN6 431 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 OTOP3Q7RTS5 596 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 CCAR2Q8N163 923 aaKnown RBP16.34■□□□□ 0.21
DDX55-203ENST00000421670 ARFGAP1Q8N6T3 406 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 NIPA2Q8N8Q9 360 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 SH3RF2Q8TEC5 729 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 RSPRY1Q96DX4 576 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 FCRL2Q96LA5 508 aaPredicted RBP16.34■□□□□ 0.21
DDX55-203ENST00000421670 CFAP97Q9P2B7 532 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 HBS1LQ9Y450 684 aaKnown RBP16.34■□□□□ 0.21
DDX55-203ENST00000421670 GRID2IPA4D2P6 1211 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 C2CD4DB7Z1M9 353 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 LEFTY2O00292 366 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 STC2O76061 302 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 RNF8O76064 485 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 ENDOD1O94919 500 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 MOCS2O96007 188 aaPredicted RBP16.34■□□□□ 0.21
DDX55-203ENST00000421670 IGLV3-27P01718 113 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 DESP17661 470 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 COG7P83436 770 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 NNTQ13423 1086 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 TDRD5Q8NAT2 981 aaKnown RBP16.34■□□□□ 0.21
DDX55-203ENST00000421670 RNF34Q969K3 372 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 ACSF2Q96CM8 615 aaPredicted RBP16.34■□□□□ 0.21
DDX55-203ENST00000421670 SLC39A13Q96H72 371 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 RPGRIP1Q96KN7 1286 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 PHF7Q9BWX1 381 aaPredicted RBP16.34■□□□□ 0.21
DDX55-203ENST00000421670 IRX2Q9BZI1 471 aaPredicted RBP16.34■□□□□ 0.21
DDX55-203ENST00000421670 TMPRSS4Q9NRS4 437 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 MYOFQ9NZM1 2061 aa16.34■□□□□ 0.21
DDX55-203ENST00000421670 F9P00740 461 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 CXCR3P49682 368 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 USP4Q13107 963 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 ZNF77Q15935 545 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 SCYL2Q6P3W7 929 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 SND1Q7KZF4 910 aaKnown RBP eCLIP16.33■□□□□ 0.2
DDX55-203ENST00000421670 DAAM2Q86T65 1068 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 CCDC185Q8N715 623 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 KIAA1524Q8TCG1 905 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 FGF14Q92915 247 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 PLD4Q96BZ4 506 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 LRRC3BQ96PB8 259 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 PEBP4Q96S96 227 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 KXD1Q9BQD3 176 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 ANLNQ9NQW6 1124 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.33■□□□□ 0.2
DDX55-203ENST00000421670 PCSK1NQ9UHG2 260 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 TICRRQ7Z2Z1 1910 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 MYO10Q9HD67 2058 aa16.33■□□□□ 0.2
DDX55-203ENST00000421670 I6L893 689 aaPredicted RBP16.32■□□□□ 0.2
DDX55-203ENST00000421670 PALMO75781 387 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 WEE1P30291 646 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 MIPP30301 263 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 CORO1AP31146 461 aaKnown RBP16.32■□□□□ 0.2
DDX55-203ENST00000421670 CCR1P32246 355 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 MAN1A1P33908 653 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 SSR1P43307 286 aaKnown RBP16.32■□□□□ 0.2
DDX55-203ENST00000421670 KPNA1P52294 538 aaPredicted RBP16.32■□□□□ 0.2
DDX55-203ENST00000421670 RING1Q06587 406 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 ACAP1Q15027 740 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 IFI16Q16666 785 aaKnown RBP16.32■□□□□ 0.2
DDX55-203ENST00000421670 PUS10Q3MIT2 529 aaKnown RBP16.32■□□□□ 0.2
DDX55-203ENST00000421670 TANGO2Q6ICL3 276 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 C11orf63Q6NUN7 778 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 CC2D1AQ6P1N0 951 aaPredicted RBP16.32■□□□□ 0.2
DDX55-203ENST00000421670 PARM1Q6UWI2 310 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 CELF5Q8N6W0 485 aaKnown RBP16.32■□□□□ 0.2
DDX55-203ENST00000421670 LRRC57Q8N9N7 239 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 TKTL2Q9H0I9 626 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 WDCPQ9H6R7 721 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 KIF9Q9HAQ2 790 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 TRPV4Q9HBA0 871 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 EPS15L1Q9UBC2 864 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 XPO7Q9UIA9 1087 aaKnown RBP16.32■□□□□ 0.2
DDX55-203ENST00000421670 FAM50BQ9Y247 325 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 ZKSCAN5Q9Y2L8 839 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 ZFP37Q9Y6Q3 630 aaPredicted RBP16.32■□□□□ 0.2
DDX55-203ENST00000421670 COL4A3Q01955 1670 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 DOCK4Q8N1I0 1966 aa16.32■□□□□ 0.2
DDX55-203ENST00000421670 MUC3AQ02505 3323 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 HEPACAM2A8MVW5 462 aa16.31■□□□□ 0.2
DDX55-203ENST00000421670 SPOPO43791 374 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms