RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 BHLHA9Q7RTU4 235 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 SYT12Q8IV01 421 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 TRIML1Q8N9V2 468 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 SLC35F5Q8WV83 523 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 IRGQQ8WZA9 623 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 PIGKQ92643 395 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 HSFY1Q96LI6 401 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 ACOX2Q99424 681 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 EDEM2Q9BV94 578 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 CD248Q9HCU0 757 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 CEP192Q8TEP8 1941 aa19.27■□□□□ 0.67
VPS16-204ENST00000417508 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 LATS1O95835 1130 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 WASP42768 502 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 MFAP3P55082 362 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 KCNH2Q12809 1159 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 LMAN2Q12907 356 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 PAK1Q13153 545 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 TCEAL6Q6IPX3 200 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 FMNL3Q8IVF7 1028 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 TRIM59Q8IWR1 403 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 TMEFF1Q8IYR6 380 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 TFAP2BQ92481 460 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 BHMTQ93088 406 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 TCEAL3Q969E4 200 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 IRX2Q9BZI1 471 aaPredicted RBP19.26■□□□□ 0.67
VPS16-204ENST00000417508 THAP10Q9P2Z0 257 aaPredicted RBP19.26■□□□□ 0.67
VPS16-204ENST00000417508 STOML2Q9UJZ1 356 aa19.26■□□□□ 0.67
VPS16-204ENST00000417508 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.26■□□□□ 0.67
VPS16-204ENST00000417508 LNP1A1A4G5 178 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 YJEFN3A6XGL0 299 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 E7ENQ6 273 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 DAOAP59103 153 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 STARD3Q14849 445 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 EIF4HQ15056 248 aaKnown RBP19.25■□□□□ 0.67
VPS16-204ENST00000417508 MPPE1Q53F39 396 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 LYSMD4Q5XG99 296 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 RABEPKQ7Z6M1 372 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 METTL3Q86U44 580 aaKnown RBP19.25■□□□□ 0.67
VPS16-204ENST00000417508 FRMD1Q8N878 549 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 CEP76Q8TAP6 659 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 DDI1Q8WTU0 396 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 NDRG1Q92597 394 aaKnown RBP19.25■□□□□ 0.67
VPS16-204ENST00000417508 PIWIL1Q96J94 861 aaKnown RBP19.25■□□□□ 0.67
VPS16-204ENST00000417508 SRRTQ9BXP5 876 aaKnown RBP19.25■□□□□ 0.67
VPS16-204ENST00000417508 NUSAP1Q9BXS6 441 aaKnown RBP19.25■□□□□ 0.67
VPS16-204ENST00000417508 TMEM9BQ9NQ34 198 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 CALCOCO1Q9P1Z2 691 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 CTNND2Q9UQB3 1225 aa19.25■□□□□ 0.67
VPS16-204ENST00000417508 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.25■□□□□ 0.67
VPS16-204ENST00000417508 C4orf47A7E2U8 309 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 RNF225M0QZC1 329 aaPredicted RBP19.24■□□□□ 0.67
VPS16-204ENST00000417508 BIN1O00499 593 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 GADD45BO75293 160 aaPredicted RBP19.24■□□□□ 0.67
VPS16-204ENST00000417508 FBXO21O94952 628 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 AFPP02771 609 aaKnown RBP19.24■□□□□ 0.67
VPS16-204ENST00000417508 IRX4P78413 519 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 RPL6Q02878 288 aaKnown RBP19.24■□□□□ 0.67
VPS16-204ENST00000417508 ENPP2Q13822 863 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 ADGRF1Q5T601 910 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 PEAR1Q5VY43 1037 aaPredicted RBP19.24■□□□□ 0.67
VPS16-204ENST00000417508 KIAA1211LQ6NV74 962 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 PMF1Q6P1K2 205 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 MSANTD2Q6P1R3 559 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 ANKS1BQ7Z6G8 1248 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 GOLGA1Q92805 767 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 ELOVL2Q9NXB9 296 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 CACNA2D2Q9NY47 1150 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 SFMBT1Q9UHJ3 866 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 PILRBQ9UKJ0 227 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 CNTN6Q9UQ52 1028 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 STON1Q9Y6Q2 735 aa19.24■□□□□ 0.67
VPS16-204ENST00000417508 LCP1P13796 627 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 NDUFV2P19404 249 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 PTGER3P43115 390 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 STX17P56962 302 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 TRIM61Q5EBN2 209 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 SMYD5Q6GMV2 418 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 SLC23A3Q6PIS1 610 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 RRAGAQ7L523 313 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 UNC45BQ8IWX7 931 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 RBBP8NLQ8NC74 664 aaPredicted RBP19.23■□□□□ 0.67
VPS16-204ENST00000417508 EDEM1Q92611 657 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 AZIN2Q96A70 460 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 TMA16Q96EY4 203 aaKnown RBP19.23■□□□□ 0.67
VPS16-204ENST00000417508 P2RY11Q96G91 374 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 FAM81BQ96LP2 452 aa19.23■□□□□ 0.67
VPS16-204ENST00000417508 TNRC6BQ9UPQ9 1833 aaKnown RBP19.23■□□□□ 0.67
VPS16-204ENST00000417508 IGHV1OR15-9A0A0B4J2B8 117 aa19.22■□□□□ 0.67
VPS16-204ENST00000417508 WASH3PC4AMC7 463 aa19.22■□□□□ 0.67
VPS16-204ENST00000417508 M0QYV0 167 aa19.22■□□□□ 0.67
VPS16-204ENST00000417508 KCNK5O95279 499 aa19.22■□□□□ 0.67
VPS16-204ENST00000417508 RING1Q06587 406 aa19.22■□□□□ 0.67
VPS16-204ENST00000417508 ZNF33AQ06730 810 aa19.22■□□□□ 0.67
VPS16-204ENST00000417508 MEA1Q16626 185 aa19.22■□□□□ 0.67
VPS16-204ENST00000417508 GEN1Q17RS7 908 aa19.22■□□□□ 0.67
VPS16-204ENST00000417508 DUOXA1Q1HG43 343 aa19.22■□□□□ 0.67
VPS16-204ENST00000417508 NUGGCQ68CJ6 796 aa19.22■□□□□ 0.67
VPS16-204ENST00000417508 ENOSF1Q7L5Y1 443 aa19.22■□□□□ 0.67
VPS16-204ENST00000417508 KAT5Q92993 513 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms