RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 MSI1O43347 362 aaKnown RBP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 HOXA2O43364 376 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 BANF1O75531 89 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 CLTBP09497 229 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 MYZAPP0CAP1 466 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 RPL17P18621 184 aaKnown RBP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 ITGB8P26012 769 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 ADRA1BP35368 520 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 SLCO1A2P46721 670 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 YWHAGP61981 247 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 CAV1Q03135 178 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 FAXCQ5TGI0 409 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 ANKRD22Q5VYY1 191 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 BTBD8Q5XKL5 378 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 NCBP2-AS2Q69YL0 99 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 LRIG3Q6UXM1 1119 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 CAPN12Q6ZSI9 719 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 BNIPLQ7Z465 357 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 LRRC43Q8N309 656 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 VWCEQ96DN2 955 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 RBM15Q96T37 977 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 SEPT5Q99719 369 aaPredicted RBP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 MRPL9Q9BYD2 267 aaKnown RBP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 TKTL2Q9H0I9 626 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 WDCPQ9H6R7 721 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 PCDHB5Q9Y5E4 795 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 USP3Q9Y6I4 520 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 GREB1Q4ZG55 1949 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 A0A1W2PQH9 124 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 TCRBV7S3A2A0A539 114 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 F5H423 210 aaPredicted RBP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 EEF2KO00418 725 aaKnown RBP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 CAPN15O75808 1086 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 CSF2RAP15509 400 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 FGFR3P22607 806 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 ALDH7A1P49419 539 aaKnown RBP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 USP46P62068 366 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 TERF2Q15554 542 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 NFE2Q16621 373 aaPredicted RBP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 MGAT5BQ3V5L5 792 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 RNASEH2BQ5TBB1 312 aaKnown RBP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 FBXO46Q6PJ61 603 aaPredicted RBP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 RNF19BQ6ZMZ0 732 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 TP53INP2Q8IXH6 220 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 DQX1Q8TE96 717 aaKnown RBP11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 IRGQQ8WZA9 623 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 NMUR1Q9HB89 426 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 TMBIM4Q9HC24 238 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 SAYSD1Q9NPB0 183 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 ARHGEF4Q9NR80 690 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 FBXW11Q9UKB1 542 aa11.06□□□□□ -0.64
SMPD4P1-201ENST00000416717 H3BRJ5 948 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 MFSD11O43934 449 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 ACRP10323 421 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 ATP1A2P50993 1020 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 LBX1P52954 281 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 DEFB103AP81534 67 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 MRPL58Q14197 206 aaKnown RBP11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 FASTKD3Q14CZ7 662 aaKnown RBP11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 KCNT2Q6UVM3 1135 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 SCD5Q86SK9 330 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 ZCCHC9Q8N567 271 aaKnown RBP11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 FAM76AQ8TAV0 307 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 CCDC110Q8TBZ0 833 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 EPS8L3Q8TE67 593 aaKnown RBP11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 CPT1BQ92523 772 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 FAM129AQ9BZQ8 928 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 SIK2Q9H0K1 926 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 CRISPLD1Q9H336 500 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 C11orf49Q9H6J7 331 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 USP29Q9HBJ7 922 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 PNPLA8Q9NP80 782 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 OSER1Q9NX31 292 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 DTLQ9NZJ0 730 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 CDY1Q9Y6F8 540 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 ADAM12O43184 909 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 HPDP32754 393 aaPredicted RBP11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 ACTN2P35609 894 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 GJA8P48165 433 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 GABPB1Q06547 395 aaPredicted RBP11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 DUSP4Q13115 394 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 TTC19Q6DKK2 380 aaPredicted RBP11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 CNKSR3Q6P9H4 555 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 ANKMY2Q8IV38 441 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 NUP93Q8N1F7 819 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 PRCCQ92733 491 aaPredicted RBP11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 CASP10Q92851 521 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 ATP6V1G3Q96LB4 118 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 LGMNQ99538 433 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 TTPALQ9BTX7 342 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 CEP41Q9BYV8 373 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 NINJ2Q9NZG7 142 aa11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.05□□□□□ -0.64
SMPD4P1-201ENST00000416717 MTMR11A4FU01 709 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 TRIM43BA6NCK2 446 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 OR6C75A6NL08 312 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 DGKIO75912 1065 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 PARNO95453 639 aaKnown RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 NUDT17P0C025 328 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 SRGAP2BP0DMP2 458 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms