RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ZNF217O75362 1048 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 FGFR1OPO95684 399 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 HARS2P49590 506 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 MARSP56192 900 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 GCNT1Q02742 428 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 KCNH2Q12809 1159 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 TRIM59Q8IWR1 403 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 FAM217AQ8IXS0 508 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 TMEFF1Q8IYR6 380 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 FRMD1Q8N878 549 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 TRIML1Q8N9V2 468 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 SLC35F5Q8WV83 523 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 LSM14BQ9BX40 385 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 SRRTQ9BXP5 876 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 SLC2A11Q9BYW1 496 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 CALCOCO1Q9P1Z2 691 aa18.39■□□□□ 0.53
PDLIM2-208ENST00000416159 YJEFN3A6XGL0 299 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 E7ENQ6 273 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 AP5Z1O43299 807 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 AFPP02771 609 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 LCP1P13796 627 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 MFAP3P55082 362 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 DAOAP59103 153 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 KIAA1211LQ6NV74 962 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 RRAGAQ7L523 313 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 RBBP8NLQ8NC74 664 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 DDI1Q8WTU0 396 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 IRGQQ8WZA9 623 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 EDEM1Q92611 657 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 KAT5Q92993 513 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 P2RY11Q96G91 374 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 HSFY1Q96LI6 401 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 CD248Q9HCU0 757 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 CACNA2D2Q9NY47 1150 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 THAP10Q9P2Z0 257 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 SFMBT1Q9UHJ3 866 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 EVLQ9UI08 416 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 PI4KAP42356 2102 aa18.38■□□□□ 0.53
PDLIM2-208ENST00000416159 LNP1A1A4G5 178 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 M0QYV0 167 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 LATS1O95835 1130 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 NDUFV2P19404 249 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 BRD2P25440 801 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 RGS7P49802 495 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 ZNF132P52740 706 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 ZNF445P59923 1031 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 MPPE1Q53F39 396 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 DAB2IPQ5VWQ8 1189 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 LYSMD4Q5XG99 296 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 PMF1Q6P1K2 205 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 ANKS1BQ7Z6G8 1248 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 SYT12Q8IV01 421 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 ARHGEF19Q8IW93 802 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 PIWIL1Q96J94 861 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 RAD54BQ9Y620 910 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 STON1Q9Y6Q2 735 aa18.37■□□□□ 0.53
PDLIM2-208ENST00000416159 C4orf47A7E2U8 309 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 PATE3B3GLJ2 98 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 WASH3PC4AMC7 463 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 KCNA4P22459 653 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 PTGER3P43115 390 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 IRX4P78413 519 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 RPL6Q02878 288 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 STARD3Q14849 445 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 GEN1Q17RS7 908 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 MSANTD2Q6P1R3 559 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 ARMCX6Q7L4S7 300 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 CEP192Q8TEP8 1941 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 ZSWIM1Q9BR11 485 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 NUSAP1Q9BXS6 441 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 TMEM9BQ9NQ34 198 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 ELOVL2Q9NXB9 296 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 KIAA1468Q9P260 1216 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 STOML2Q9UJZ1 356 aa18.36■□□□□ 0.53
PDLIM2-208ENST00000416159 IGHV1OR15-9A0A0B4J2B8 117 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 TIMM44O43615 452 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 GABBR2O75899 941 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 FBXO21O94952 628 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 HOXD12P35452 270 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 UBE2HP62256 183 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 LMAN2Q12907 356 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 ENPP2Q13822 863 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 EIF4HQ15056 248 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 TRIM61Q5EBN2 209 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 ADGRF1Q5T601 910 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 GOLGA1Q92805 767 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 TMA16Q96EY4 203 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 INTS2Q9H0H0 1204 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 CLEC4EQ9ULY5 219 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 CNTN6Q9UQ52 1028 aa18.35■□□□□ 0.53
PDLIM2-208ENST00000416159 KCNK5O95279 499 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 LTFP02788 710 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 ZNF33AQ06730 810 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 PEAR1Q5VY43 1037 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 SLC23A3Q6PIS1 610 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 METTL3Q86U44 580 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 UNC45BQ8IWX7 931 aa18.34■□□□□ 0.53
PDLIM2-208ENST00000416159 CEP76Q8TAP6 659 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms