RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 GRK2P25098 689 aa3.41□□□□□ -1.86
APP-207ENST00000415997 HOXD12P35452 270 aa3.41□□□□□ -1.86
APP-207ENST00000415997 GRK3P35626 688 aa3.41□□□□□ -1.86
APP-207ENST00000415997 SLC11A1P49279 550 aa3.41□□□□□ -1.86
APP-207ENST00000415997 PPP2R2AP63151 447 aa3.41□□□□□ -1.86
APP-207ENST00000415997 SLC5A9Q2M3M2 681 aa3.41□□□□□ -1.86
APP-207ENST00000415997 ZMAT1Q5H9K5 638 aa3.41□□□□□ -1.86
APP-207ENST00000415997 SLC9C2Q5TAH2 1124 aa3.41□□□□□ -1.86
APP-207ENST00000415997 MRM1Q6IN84 353 aaKnown RBP3.41□□□□□ -1.86
APP-207ENST00000415997 SPATA31D4Q6ZUB0 917 aa3.41□□□□□ -1.86
APP-207ENST00000415997 TAS1R1Q7RTX1 841 aa3.41□□□□□ -1.86
APP-207ENST00000415997 C11orf74Q86VG3 221 aa3.41□□□□□ -1.86
APP-207ENST00000415997 FAM228AQ86W67 206 aa3.41□□□□□ -1.86
APP-207ENST00000415997 ERICH1Q86X53 443 aa3.41□□□□□ -1.86
APP-207ENST00000415997 GPR65Q8IYL9 337 aa3.41□□□□□ -1.86
APP-207ENST00000415997 GALNT15Q8N3T1 639 aa3.41□□□□□ -1.86
APP-207ENST00000415997 NME8Q8N427 588 aa3.41□□□□□ -1.86
APP-207ENST00000415997 UHMK1Q8TAS1 419 aaKnown RBP3.41□□□□□ -1.86
APP-207ENST00000415997 LARP4BQ92615 738 aaKnown RBP3.41□□□□□ -1.86
APP-207ENST00000415997 C1orf159Q96HA4 380 aa3.41□□□□□ -1.86
APP-207ENST00000415997 PDCD2LQ9BRP1 358 aa3.41□□□□□ -1.86
APP-207ENST00000415997 HERC2P3Q9BVR0 1158 aa3.41□□□□□ -1.86
APP-207ENST00000415997 NRDE2Q9H7Z3 1164 aa3.41□□□□□ -1.86
APP-207ENST00000415997 ARMT1Q9H993 441 aa3.41□□□□□ -1.86
APP-207ENST00000415997 MLXIPQ9HAP2 919 aa3.41□□□□□ -1.86
APP-207ENST00000415997 PXMP2Q9NR77 195 aa3.41□□□□□ -1.86
APP-207ENST00000415997 CHST12Q9NRB3 414 aa3.41□□□□□ -1.86
APP-207ENST00000415997 RIC8BQ9NVN3 520 aa3.41□□□□□ -1.86
APP-207ENST00000415997 ARHGAP28Q9P2N2 729 aa3.41□□□□□ -1.86
APP-207ENST00000415997 ARPP21Q9UBL0 812 aaPredicted RBP3.41□□□□□ -1.86
APP-207ENST00000415997 DNAJB4Q9UDY4 337 aa3.41□□□□□ -1.86
APP-207ENST00000415997 PLEKHB1Q9UF11 243 aaPredicted RBP3.41□□□□□ -1.86
APP-207ENST00000415997 FBXW11Q9UKB1 542 aa3.41□□□□□ -1.86
APP-207ENST00000415997 CDC42EP3Q9UKI2 254 aa3.41□□□□□ -1.86
APP-207ENST00000415997 PILRBQ9UKJ0 227 aa3.41□□□□□ -1.86
APP-207ENST00000415997 NPFFR2Q9Y5X5 522 aa3.41□□□□□ -1.86
APP-207ENST00000415997 COL6A5A8TX70 2615 aa3.41□□□□□ -1.86
APP-207ENST00000415997 CABIN1Q9Y6J0 2220 aa3.41□□□□□ -1.86
APP-207ENST00000415997 ABCB11O95342 1321 aa3.41□□□□□ -1.86
APP-207ENST00000415997 PTPRCP08575 1304 aa3.41□□□□□ -1.86
APP-207ENST00000415997 MTCL1Q9Y4B5 1905 aaKnown RBP3.4□□□□□ -1.86
APP-207ENST00000415997 SMIM35A0A1B0GVV1 85 aa3.4□□□□□ -1.87
APP-207ENST00000415997 FAM149AA5PLN7 773 aa3.4□□□□□ -1.87
APP-207ENST00000415997 DLX3O60479 287 aa3.4□□□□□ -1.87
APP-207ENST00000415997 ZC3H11AO75152 810 aaKnown RBP eCLIP3.4□□□□□ -1.87
APP-207ENST00000415997 RPS6KA5O75582 802 aa3.4□□□□□ -1.87
APP-207ENST00000415997 MBD4O95243 580 aa3.4□□□□□ -1.87
APP-207ENST00000415997 MYBP10242 640 aa3.4□□□□□ -1.87
APP-207ENST00000415997 PSMC3P17980 439 aa3.4□□□□□ -1.87
APP-207ENST00000415997 MAKP20794 623 aa3.4□□□□□ -1.87
APP-207ENST00000415997 IBSPP21815 317 aaPredicted RBP3.4□□□□□ -1.87
APP-207ENST00000415997 BCKDHBP21953 392 aa3.4□□□□□ -1.87
APP-207ENST00000415997 ACRV1P26436 265 aa3.4□□□□□ -1.87
APP-207ENST00000415997 SLC16A2P36021 539 aa3.4□□□□□ -1.87
APP-207ENST00000415997 HSD17B4P51659 736 aa3.4□□□□□ -1.87
APP-207ENST00000415997 DSG1Q02413 1049 aa3.4□□□□□ -1.87
APP-207ENST00000415997 HHEXQ03014 270 aa3.4□□□□□ -1.87
APP-207ENST00000415997 FOXL1Q12952 345 aa3.4□□□□□ -1.87
APP-207ENST00000415997 IKQ13123 557 aaPredicted RBP3.4□□□□□ -1.87
APP-207ENST00000415997 TOP3AQ13472 1001 aaPredicted RBP3.4□□□□□ -1.87
APP-207ENST00000415997 WDR43Q15061 677 aaKnown RBP eCLIP3.4□□□□□ -1.87
APP-207ENST00000415997 FXNQ16595 210 aa3.4□□□□□ -1.87
APP-207ENST00000415997 TBR1Q16650 682 aa3.4□□□□□ -1.87
APP-207ENST00000415997 MAPK6Q16659 721 aa3.4□□□□□ -1.87
APP-207ENST00000415997 CCDC96Q2M329 555 aa3.4□□□□□ -1.87
APP-207ENST00000415997 FAM78AQ5JUQ0 283 aa3.4□□□□□ -1.87
APP-207ENST00000415997 TMCO4Q5TGY1 634 aa3.4□□□□□ -1.87
APP-207ENST00000415997 FNDC7Q5VTL7 733 aa3.4□□□□□ -1.87
APP-207ENST00000415997 BTBD8Q5XKL5 378 aa3.4□□□□□ -1.87
APP-207ENST00000415997 DPY19L2P1Q6NXN4 242 aa3.4□□□□□ -1.87
APP-207ENST00000415997 VITQ6UXI7 678 aa3.4□□□□□ -1.87
APP-207ENST00000415997 STOX1Q6ZVD7 989 aa3.4□□□□□ -1.87
APP-207ENST00000415997 MRGPRGQ86SM5 289 aa3.4□□□□□ -1.87
APP-207ENST00000415997 SYT12Q8IV01 421 aa3.4□□□□□ -1.87
APP-207ENST00000415997 NAXDQ8IW45 347 aa3.4□□□□□ -1.87
APP-207ENST00000415997 HDDC3Q8N4P3 179 aa3.4□□□□□ -1.87
APP-207ENST00000415997 MINDY1Q8N5J2 469 aa3.4□□□□□ -1.87
APP-207ENST00000415997 AMER2Q8N7J2 671 aa3.4□□□□□ -1.87
APP-207ENST00000415997 EXD3Q8N9H8 876 aa3.4□□□□□ -1.87
APP-207ENST00000415997 IL31RAQ8NI17 732 aa3.4□□□□□ -1.87
APP-207ENST00000415997 ZNF483Q8TF39 744 aaPredicted RBP3.4□□□□□ -1.87
APP-207ENST00000415997 CACTINQ8WUQ7 758 aaKnown RBP3.4□□□□□ -1.87
APP-207ENST00000415997 DCAF4Q8WV16 495 aa3.4□□□□□ -1.87
APP-207ENST00000415997 PIGKQ92643 395 aa3.4□□□□□ -1.87
APP-207ENST00000415997 NXPE2Q96DL1 559 aa3.4□□□□□ -1.87
APP-207ENST00000415997 TRMT61BQ9BVS5 477 aaKnown RBP3.4□□□□□ -1.87
APP-207ENST00000415997 NUSAP1Q9BXS6 441 aaKnown RBP3.4□□□□□ -1.87
APP-207ENST00000415997 FAM49AQ9H0Q0 323 aaPredicted RBP3.4□□□□□ -1.87
APP-207ENST00000415997 BRD9Q9H8M2 597 aa3.4□□□□□ -1.87
APP-207ENST00000415997 TRPV4Q9HBA0 871 aa3.4□□□□□ -1.87
APP-207ENST00000415997 ST7Q9NRC1 585 aa3.4□□□□□ -1.87
APP-207ENST00000415997 TBC1D13Q9NVG8 400 aa3.4□□□□□ -1.87
APP-207ENST00000415997 POLR3BQ9NW08 1133 aaPredicted RBP3.4□□□□□ -1.87
APP-207ENST00000415997 MARCH5Q9NX47 278 aa3.4□□□□□ -1.87
APP-207ENST00000415997 FNIP2Q9P278 1114 aa3.4□□□□□ -1.87
APP-207ENST00000415997 GON4LQ3T8J9 2241 aa3.39□□□□□ -1.87
APP-207ENST00000415997 VWA8A3KMH1 1905 aa3.39□□□□□ -1.87
APP-207ENST00000415997 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.39□□□□□ -1.87
APP-207ENST00000415997 A0A1W2PQU0 124 aa3.39□□□□□ -1.87
APP-207ENST00000415997 RRN3P2A6NIE6 340 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms