RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 DHX35Q9H5Z1 703 aaKnown RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 IGFLR1Q9H665 355 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 ASAH2Q9NR71 780 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 MTMR10Q9NXD2 777 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 DDX56Q9NY93 547 aaKnown RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 DNMT3BQ9UBC3 853 aaKnown RBP10.06□□□□□ -0.8
RIF1-202ENST00000414861 NR2E1Q9Y466 385 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 SNX10Q9Y5X0 201 aa10.06□□□□□ -0.8
RIF1-202ENST00000414861 A0A1W2PRU2 124 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 PGRMC1O00264 195 aaKnown RBP10.05□□□□□ -0.8
RIF1-202ENST00000414861 LINC01565O15544 149 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 F9P00740 461 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 HMBSP08397 361 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 KRT10P13645 584 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 KDELR1P24390 212 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 ADRA1BP35368 520 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 HYAL1Q12794 435 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 DPYSL3Q14195 570 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 DPYSL2Q16555 572 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 BOLA3Q53S33 107 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 ACTRT1Q8TDG2 376 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 UBE2Q2Q8WVN8 375 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 NTAN1Q96AB6 310 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 SLC39A13Q96H72 371 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 KCTD15Q96SI1 283 aaPredicted RBP10.05□□□□□ -0.8
RIF1-202ENST00000414861 NCAPGQ9BPX3 1015 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 HEMGNQ9BXL5 484 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 PCDH18Q9HCL0 1135 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 TRPC7Q9HCX4 862 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 OLA1Q9NTK5 396 aaKnown RBP10.05□□□□□ -0.8
RIF1-202ENST00000414861 UNC80Q8N2C7 3258 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 hCG_1818297A0A087WSY0 165 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 CCDC195A0A1B0GUA6 201 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 A0A1W2PPC1 479 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 SLC12A8A0AV02 714 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 SPDYE4A6NLX3 237 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 FAM72CH0Y354 149 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 RHOP08100 348 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 HNRNPA1P09651 372 aaKnown RBP eCLIP10.05□□□□□ -0.8
RIF1-202ENST00000414861 L1CAMP32004 1257 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 TUBP50607 506 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 EPHA5P54756 1037 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 SCAPQ12770 1279 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 GRIN2CQ14957 1233 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 PPP6R3Q5H9R7 873 aaPredicted RBP10.05□□□□□ -0.8
RIF1-202ENST00000414861 CCDC181Q5TID7 509 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 FAM72AQ5TYM5 149 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 FAM72DQ6L9T8 149 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 TMC5Q6UXY8 1006 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 RTL10Q7L3V2 364 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 FAM72BQ86X60 149 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 SLC13A5Q86YT5 568 aaPredicted RBP10.05□□□□□ -0.8
RIF1-202ENST00000414861 RCOR2Q8IZ40 523 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 ZNF276Q8N554 614 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 KCTD6Q8NC69 237 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 SHKBP1Q8TBC3 707 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 HDAC7Q8WUI4 952 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 RBM41Q96IZ5 413 aaKnown RBP10.05□□□□□ -0.8
RIF1-202ENST00000414861 CYP2S1Q96SQ9 504 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 CALN1Q9BXU9 219 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 OSBPL8Q9BZF1 889 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 PRKD2Q9BZL6 878 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 NSUN3Q9H649 340 aaKnown RBP10.05□□□□□ -0.8
RIF1-202ENST00000414861 WDCPQ9H6R7 721 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 ZDHHC7Q9NXF8 308 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 ARHGEF38Q9NXL2 777 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 CDH22Q9UJ99 828 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 TLR6Q9Y2C9 796 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 DOCK4Q8N1I0 1966 aa10.05□□□□□ -0.8
RIF1-202ENST00000414861 MOSPD3O75425 235 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 MOCS2O96007 188 aaPredicted RBP10.04□□□□□ -0.8
RIF1-202ENST00000414861 IGLV3-27P01718 113 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 IL4RP24394 825 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 GBP1P32455 592 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 ATP5C1P36542 298 aaKnown RBP10.04□□□□□ -0.8
RIF1-202ENST00000414861 PPP3CCP48454 512 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 KCNQ1P51787 676 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 TBX4P57082 545 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 C2orf54Q08AI8 447 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 NNTQ13423 1086 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 TUBB2AQ13885 445 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 ADGRE1Q14246 886 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 TRIP4Q15650 581 aaPredicted RBP10.04□□□□□ -0.8
RIF1-202ENST00000414861 TAZQ16635 292 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 KAZNQ674X7 775 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 SND1Q7KZF4 910 aaKnown RBP eCLIP10.04□□□□□ -0.8
RIF1-202ENST00000414861 GRASPQ7Z6J2 395 aaPredicted RBP10.04□□□□□ -0.8
RIF1-202ENST00000414861 FAM71BQ8TC56 605 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 TSC1Q92574 1164 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 NUP205Q92621 2012 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 RNF34Q969K3 372 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 ZFRQ96KR1 1074 aaKnown RBP10.04□□□□□ -0.8
RIF1-202ENST00000414861 TUBB2BQ9BVA1 445 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 AP1M1Q9BXS5 423 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 NACA2Q9H009 215 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 ATXN3LQ9H3M9 355 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 DNMT3LQ9UJW3 386 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 TTC7AQ9ULT0 858 aaPredicted RBP10.04□□□□□ -0.8
RIF1-202ENST00000414861 DOCK8Q8NF50 2099 aa10.04□□□□□ -0.8
RIF1-202ENST00000414861 KCNU1A8MYU2 1149 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms